Hb_001773_010

Information

Type -
Description -
Location Contig1773: 1307-9993
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001773_010 0.0 - - -
2 Hb_010775_050 0.1482334931 - - -
3 Hb_000078_170 0.2849073854 - - -
4 Hb_005451_020 0.2864153595 - - PREDICTED: uncharacterized protein LOC104105697 [Nicotiana tomentosiformis]
5 Hb_001965_020 0.290670479 - - hypothetical protein B456_013G048700 [Gossypium raimondii]
6 Hb_002637_020 0.2922393143 - - -
7 Hb_000330_080 0.2963483722 - - auxilin, putative [Ricinus communis]
8 Hb_000703_300 0.3111099531 - - -
9 Hb_002249_210 0.3116920479 - - -
10 Hb_003038_150 0.3177106317 - - -
11 Hb_011574_010 0.3288024505 - - -
12 Hb_001709_130 0.333852475 - - PREDICTED: uncharacterized protein LOC105636491 [Jatropha curcas]
13 Hb_017604_030 0.3345306756 - - -
14 Hb_105581_010 0.33846748 - - hypothetical protein, partial [Pseudomonas fluorescens]
15 Hb_001496_030 0.3399204909 - - hypothetical protein CISIN_1g0170981mg, partial [Citrus sinensis]
16 Hb_008758_010 0.3436846045 - - hypothetical protein PRUPE_ppa022673mg [Prunus persica]
17 Hb_005962_010 0.3565387994 - - -
18 Hb_011639_150 0.3578379627 - - -
19 Hb_012098_050 0.3605971622 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g36180 isoform X1 [Nicotiana tomentosiformis]
20 Hb_001031_050 0.3678647274 - - -

Gene co-expression network

sample Hb_001773_010 Hb_001773_010 Hb_010775_050 Hb_010775_050 Hb_001773_010--Hb_010775_050 Hb_000078_170 Hb_000078_170 Hb_001773_010--Hb_000078_170 Hb_005451_020 Hb_005451_020 Hb_001773_010--Hb_005451_020 Hb_001965_020 Hb_001965_020 Hb_001773_010--Hb_001965_020 Hb_002637_020 Hb_002637_020 Hb_001773_010--Hb_002637_020 Hb_000330_080 Hb_000330_080 Hb_001773_010--Hb_000330_080 Hb_010775_050--Hb_005451_020 Hb_010775_050--Hb_000078_170 Hb_001709_130 Hb_001709_130 Hb_010775_050--Hb_001709_130 Hb_010775_050--Hb_001965_020 Hb_010775_050--Hb_000330_080 Hb_005962_010 Hb_005962_010 Hb_000078_170--Hb_005962_010 Hb_011639_150 Hb_011639_150 Hb_000078_170--Hb_011639_150 Hb_000078_170--Hb_000330_080 Hb_008556_020 Hb_008556_020 Hb_000078_170--Hb_008556_020 Hb_000078_170--Hb_001709_130 Hb_002311_230 Hb_002311_230 Hb_000078_170--Hb_002311_230 Hb_001160_010 Hb_001160_010 Hb_005451_020--Hb_001160_010 Hb_004195_260 Hb_004195_260 Hb_005451_020--Hb_004195_260 Hb_002249_210 Hb_002249_210 Hb_005451_020--Hb_002249_210 Hb_021068_010 Hb_021068_010 Hb_005451_020--Hb_021068_010 Hb_001031_050 Hb_001031_050 Hb_001965_020--Hb_001031_050 Hb_001965_020--Hb_000330_080 Hb_032920_100 Hb_032920_100 Hb_001965_020--Hb_032920_100 Hb_001965_020--Hb_001709_130 Hb_001965_020--Hb_021068_010 Hb_183574_010 Hb_183574_010 Hb_001965_020--Hb_183574_010 Hb_002637_020--Hb_000078_170 Hb_000085_030 Hb_000085_030 Hb_002637_020--Hb_000085_030 Hb_002637_020--Hb_002311_230 Hb_002637_020--Hb_000330_080 Hb_000140_430 Hb_000140_430 Hb_002637_020--Hb_000140_430 Hb_000330_080--Hb_032920_100 Hb_000330_080--Hb_001709_130 Hb_008123_010 Hb_008123_010 Hb_000330_080--Hb_008123_010 Hb_004884_020 Hb_004884_020 Hb_000330_080--Hb_004884_020 Hb_003058_020 Hb_003058_020 Hb_000330_080--Hb_003058_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0274269 0 0 0 0.0822477 0.019322
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0317742 0.080873

CAGE analysis