Hb_000922_410

Information

Type -
Description -
Location Contig922: 318855-322945
Sequence    

Annotation

kegg
ID rcu:RCOM_1510360
description anthranilate phosphoribosyltransferase, putative (EC:2.4.2.18)
nr
ID XP_012080040.1
description PREDICTED: anthranilate phosphoribosyltransferase, chloroplastic [Jatropha curcas]
swissprot
ID Q02166
description Anthranilate phosphoribosyltransferase, chloroplastic OS=Arabidopsis thaliana GN=PAT1 PE=2 SV=1
trembl
ID A0A067KGW1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11455 PE=3 SV=1
Gene Ontology
ID GO:0009570
description anthranilate chloroplastic

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_62521: 318950-323123
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000922_410 0.0 - - PREDICTED: anthranilate phosphoribosyltransferase, chloroplastic [Jatropha curcas]
2 Hb_002728_070 0.0775726879 - - PREDICTED: quinone oxidoreductase-like protein 2 homolog [Jatropha curcas]
3 Hb_012098_080 0.0906803338 - - KOM, putative [Ricinus communis]
4 Hb_000025_470 0.0913111465 - - PREDICTED: signal peptide peptidase [Jatropha curcas]
5 Hb_000638_120 0.0918061491 - - PREDICTED: 2-oxoisovalerate dehydrogenase subunit alpha 2, mitochondrial-like [Jatropha curcas]
6 Hb_000139_370 0.0927820296 - - ubiquitin-activating enzyme E1c, putative [Ricinus communis]
7 Hb_009467_060 0.1048852277 - - PREDICTED: chromo domain-containing protein LHP1 isoform X1 [Jatropha curcas]
8 Hb_007632_240 0.1064824935 - - transporter, putative [Ricinus communis]
9 Hb_001141_020 0.1071603498 - - PREDICTED: stress-induced-phosphoprotein 1 [Jatropha curcas]
10 Hb_011930_160 0.107388341 - - PREDICTED: tetratricopeptide repeat protein 38-like [Jatropha curcas]
11 Hb_000058_100 0.108061736 - - PREDICTED: RNA-directed DNA methylation 4 [Jatropha curcas]
12 Hb_003375_070 0.1091596348 - - PREDICTED: alkylated DNA repair protein alkB homolog 8 [Jatropha curcas]
13 Hb_001289_080 0.109332396 - - PREDICTED: protein YLS9-like [Jatropha curcas]
14 Hb_166222_010 0.1094840407 - - hypothetical protein POPTR_0017s08350g [Populus trichocarpa]
15 Hb_006114_030 0.1106144349 transcription factor TF Family: SET hypothetical protein CISIN_1g011639mg [Citrus sinensis]
16 Hb_000260_170 0.1107229187 - - PREDICTED: putative zinc transporter At3g08650 [Cucumis sativus]
17 Hb_000627_230 0.1124451769 - - Uracil phosphoribosyltransferase, putative [Ricinus communis]
18 Hb_027472_150 0.1138320933 - - PREDICTED: DEAD-box ATP-dependent RNA helicase 10 [Jatropha curcas]
19 Hb_000032_280 0.1142760556 - - PREDICTED: long chain acyl-CoA synthetase 4-like [Jatropha curcas]
20 Hb_000915_260 0.1145706961 - - PREDICTED: uncharacterized protein LOC105628514 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_000922_410 Hb_000922_410 Hb_002728_070 Hb_002728_070 Hb_000922_410--Hb_002728_070 Hb_012098_080 Hb_012098_080 Hb_000922_410--Hb_012098_080 Hb_000025_470 Hb_000025_470 Hb_000922_410--Hb_000025_470 Hb_000638_120 Hb_000638_120 Hb_000922_410--Hb_000638_120 Hb_000139_370 Hb_000139_370 Hb_000922_410--Hb_000139_370 Hb_009467_060 Hb_009467_060 Hb_000922_410--Hb_009467_060 Hb_002728_070--Hb_000025_470 Hb_054865_120 Hb_054865_120 Hb_002728_070--Hb_054865_120 Hb_000058_100 Hb_000058_100 Hb_002728_070--Hb_000058_100 Hb_000329_140 Hb_000329_140 Hb_002728_070--Hb_000329_140 Hb_027472_150 Hb_027472_150 Hb_002728_070--Hb_027472_150 Hb_004310_130 Hb_004310_130 Hb_002728_070--Hb_004310_130 Hb_105123_010 Hb_105123_010 Hb_012098_080--Hb_105123_010 Hb_155159_030 Hb_155159_030 Hb_012098_080--Hb_155159_030 Hb_166222_010 Hb_166222_010 Hb_012098_080--Hb_166222_010 Hb_002496_010 Hb_002496_010 Hb_012098_080--Hb_002496_010 Hb_001301_100 Hb_001301_100 Hb_012098_080--Hb_001301_100 Hb_008748_040 Hb_008748_040 Hb_000025_470--Hb_008748_040 Hb_000025_470--Hb_054865_120 Hb_011671_040 Hb_011671_040 Hb_000025_470--Hb_011671_040 Hb_000025_470--Hb_000058_100 Hb_003688_130 Hb_003688_130 Hb_000025_470--Hb_003688_130 Hb_001289_080 Hb_001289_080 Hb_000638_120--Hb_001289_080 Hb_007632_240 Hb_007632_240 Hb_000638_120--Hb_007632_240 Hb_003438_050 Hb_003438_050 Hb_000638_120--Hb_003438_050 Hb_003025_110 Hb_003025_110 Hb_000638_120--Hb_003025_110 Hb_004689_050 Hb_004689_050 Hb_000638_120--Hb_004689_050 Hb_000638_120--Hb_009467_060 Hb_172632_040 Hb_172632_040 Hb_000139_370--Hb_172632_040 Hb_003375_070 Hb_003375_070 Hb_000139_370--Hb_003375_070 Hb_000915_260 Hb_000915_260 Hb_000139_370--Hb_000915_260 Hb_010174_040 Hb_010174_040 Hb_000139_370--Hb_010174_040 Hb_000139_370--Hb_007632_240 Hb_002273_120 Hb_002273_120 Hb_000139_370--Hb_002273_120 Hb_001141_020 Hb_001141_020 Hb_009467_060--Hb_001141_020 Hb_009467_060--Hb_003025_110 Hb_001199_020 Hb_001199_020 Hb_009467_060--Hb_001199_020 Hb_002271_030 Hb_002271_030 Hb_009467_060--Hb_002271_030 Hb_000025_110 Hb_000025_110 Hb_009467_060--Hb_000025_110 Hb_001006_140 Hb_001006_140 Hb_009467_060--Hb_001006_140
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
31.091 7.41598 18.5385 19.6518 36.6727 33.6032
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
42.7833 17.6875 18.8942 33.215 30.3731

CAGE analysis