Hb_000696_300

Information

Type -
Description -
Location Contig696: 217059-219495
Sequence    

Annotation

kegg
ID egr:104422249
description bifunctional protein FolD 2-like
nr
ID KCW52294.1
description hypothetical protein EUGRSUZ_J01717 [Eucalyptus grandis]
swissprot
ID A2RVV7
description Bifunctional protein FolD 1, mitochondrial OS=Arabidopsis thaliana GN=FOLD1 PE=2 SV=1
trembl
ID A0A059AEW9
description Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_J01717 PE=3 SV=1
Gene Ontology
ID GO:0004488
description bifunctional protein mitochondrial isoform x1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000696_300 0.0 - - hypothetical protein EUGRSUZ_J01717 [Eucalyptus grandis]
2 Hb_010423_020 0.0894161577 - - PREDICTED: pre-mRNA-splicing factor CWC25 homolog [Jatropha curcas]
3 Hb_004195_280 0.089788919 - - PREDICTED: CDK5RAP1-like protein [Jatropha curcas]
4 Hb_000179_020 0.0952489897 - - amidase, putative [Ricinus communis]
5 Hb_011794_060 0.0972399529 - - PREDICTED: beta-amylase 2, chloroplastic isoform X1 [Jatropha curcas]
6 Hb_002174_060 0.101559165 - - PREDICTED: pentatricopeptide repeat-containing protein At1g09900-like [Jatropha curcas]
7 Hb_000076_120 0.1070251521 - - PREDICTED: FHA domain-containing protein DDL isoform X1 [Jatropha curcas]
8 Hb_171900_100 0.1085969535 - - PREDICTED: putative uncharacterized protein DDB_G0270496 [Jatropha curcas]
9 Hb_000364_060 0.1117905762 - - JHL03K20.4 [Jatropha curcas]
10 Hb_000567_360 0.1119525037 - - hypothetical protein CISIN_1g004656mg [Citrus sinensis]
11 Hb_012098_110 0.1132784045 - - Ribonuclease 3 [Gossypium arboreum]
12 Hb_007407_040 0.1144539102 - - ankyrin repeat-containing protein, putative [Ricinus communis]
13 Hb_000690_130 0.1146234948 - - PREDICTED: uncharacterized protein LOC105631771 [Jatropha curcas]
14 Hb_000373_240 0.1169077723 - - PREDICTED: uncharacterized protein LOC105640940 isoform X1 [Jatropha curcas]
15 Hb_005839_060 0.117017489 - - PREDICTED: uncharacterized protein At2g40430 isoform X2 [Jatropha curcas]
16 Hb_006064_010 0.1174289297 - - PREDICTED: DDB1- and CUL4-associated factor 4 [Jatropha curcas]
17 Hb_000029_130 0.117628223 - - PREDICTED: ruvB-like protein 1 isoform X2 [Jatropha curcas]
18 Hb_003044_100 0.117785426 - - hypothetical protein F383_08446 [Gossypium arboreum]
19 Hb_001341_050 0.118791199 - - ATP synthase D chain, mitochondrial [Theobroma cacao]
20 Hb_009265_080 0.1194082854 - - PREDICTED: apoptosis inhibitor 5 [Jatropha curcas]

Gene co-expression network

sample Hb_000696_300 Hb_000696_300 Hb_010423_020 Hb_010423_020 Hb_000696_300--Hb_010423_020 Hb_004195_280 Hb_004195_280 Hb_000696_300--Hb_004195_280 Hb_000179_020 Hb_000179_020 Hb_000696_300--Hb_000179_020 Hb_011794_060 Hb_011794_060 Hb_000696_300--Hb_011794_060 Hb_002174_060 Hb_002174_060 Hb_000696_300--Hb_002174_060 Hb_000076_120 Hb_000076_120 Hb_000696_300--Hb_000076_120 Hb_010423_020--Hb_004195_280 Hb_010423_020--Hb_002174_060 Hb_003006_060 Hb_003006_060 Hb_010423_020--Hb_003006_060 Hb_009265_080 Hb_009265_080 Hb_010423_020--Hb_009265_080 Hb_000364_060 Hb_000364_060 Hb_010423_020--Hb_000364_060 Hb_134364_010 Hb_134364_010 Hb_010423_020--Hb_134364_010 Hb_004195_280--Hb_002174_060 Hb_004195_280--Hb_009265_080 Hb_171900_100 Hb_171900_100 Hb_004195_280--Hb_171900_100 Hb_004195_280--Hb_003006_060 Hb_004195_280--Hb_000179_020 Hb_000179_020--Hb_011794_060 Hb_000179_020--Hb_002174_060 Hb_002079_010 Hb_002079_010 Hb_000179_020--Hb_002079_010 Hb_000889_020 Hb_000889_020 Hb_000179_020--Hb_000889_020 Hb_001866_110 Hb_001866_110 Hb_000179_020--Hb_001866_110 Hb_011794_060--Hb_000889_020 Hb_003602_040 Hb_003602_040 Hb_011794_060--Hb_003602_040 Hb_011794_060--Hb_002174_060 Hb_011794_060--Hb_002079_010 Hb_001017_040 Hb_001017_040 Hb_011794_060--Hb_001017_040 Hb_002174_060--Hb_000364_060 Hb_002174_060--Hb_001866_110 Hb_000184_110 Hb_000184_110 Hb_002174_060--Hb_000184_110 Hb_000058_100 Hb_000058_100 Hb_000076_120--Hb_000058_100 Hb_000926_280 Hb_000926_280 Hb_000076_120--Hb_000926_280 Hb_004310_130 Hb_004310_130 Hb_000076_120--Hb_004310_130 Hb_000053_130 Hb_000053_130 Hb_000076_120--Hb_000053_130 Hb_150360_030 Hb_150360_030 Hb_000076_120--Hb_150360_030 Hb_007218_080 Hb_007218_080 Hb_000076_120--Hb_007218_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
3.90286 0.806798 2.27556 0.630903 3.59073 6.51187
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
2.85789 2.10077 2.39927 2.34832 1.87455

CAGE analysis