Hb_000252_020

Information

Type -
Description -
Location Contig252: 10266-23662
Sequence    

Annotation

kegg
ID rcu:RCOM_0024100
description alpha-glucan water dikinase, chloroplast precursor, putative (EC:2.7.13.3)
nr
ID XP_012085448.1
description PREDICTED: alpha-glucan water dikinase, chloroplastic [Jatropha curcas]
swissprot
ID Q8LPT9
description Alpha-glucan water dikinase, chloroplastic OS=Citrus reticulata GN=R1 PE=2 SV=1
trembl
ID A0A067JRV6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17790 PE=4 SV=1
Gene Ontology
ID GO:0005524
description pyruvate phosphate pep pyruvate binding domain isoform 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_26348: 10878-20471 , PASA_asmbl_26349: 10732-17451 , PASA_asmbl_26350: 20472-23607 , PASA_asmbl_26351: 21163-23510
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000252_020 0.0 - - PREDICTED: alpha-glucan water dikinase, chloroplastic [Jatropha curcas]
2 Hb_003952_090 0.1145894633 - - PREDICTED: threonine dehydratase biosynthetic, chloroplastic [Jatropha curcas]
3 Hb_000030_040 0.1172393457 - - yth domain-containing protein, putative [Ricinus communis]
4 Hb_000130_040 0.1192063677 - - PREDICTED: dol-P-Man:Man(6)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase [Jatropha curcas]
5 Hb_004800_080 0.1220659514 - - PREDICTED: acidic leucine-rich nuclear phosphoprotein 32-related protein [Jatropha curcas]
6 Hb_120327_010 0.1224716758 - - PREDICTED: uncharacterized protein LOC105650959 [Jatropha curcas]
7 Hb_008554_130 0.1288522347 transcription factor TF Family: MYB PREDICTED: uncharacterized protein LOC105634317 [Jatropha curcas]
8 Hb_002636_160 0.1289312615 - - PREDICTED: putative pentatricopeptide repeat-containing protein At1g13630 [Jatropha curcas]
9 Hb_130192_030 0.1311240557 - - PREDICTED: pentatricopeptide repeat-containing protein At3g12770-like [Jatropha curcas]
10 Hb_002759_150 0.1315485544 - - PREDICTED: DEAD-box ATP-dependent RNA helicase 22 isoform X1 [Jatropha curcas]
11 Hb_002248_080 0.1334789606 - - PREDICTED: probable ubiquitin-conjugating enzyme E2 25 isoform X2 [Jatropha curcas]
12 Hb_002701_040 0.1339164062 - - PREDICTED: auxin transport protein BIG [Jatropha curcas]
13 Hb_009838_050 0.1342688783 - - conserved hypothetical protein [Ricinus communis]
14 Hb_002477_280 0.1347131395 - - PREDICTED: mitochondrial import inner membrane translocase subunit TIM23-2 [Jatropha curcas]
15 Hb_000827_070 0.1347520553 desease resistance Gene Name: NB-ARC PREDICTED: protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1-like [Jatropha curcas]
16 Hb_001190_070 0.1349221281 - - PREDICTED: mitochondrial ubiquitin ligase activator of nfkb 1-A [Jatropha curcas]
17 Hb_002477_030 0.1358387493 transcription factor TF Family: MYB-related PREDICTED: uncharacterized protein LOC105631404 isoform X1 [Jatropha curcas]
18 Hb_000928_300 0.136968454 - - PREDICTED: pentatricopeptide repeat-containing protein At3g03580 [Jatropha curcas]
19 Hb_000107_330 0.1378720707 - - PREDICTED: pentatricopeptide repeat-containing protein At4g38150 [Jatropha curcas]
20 Hb_009558_030 0.1411541719 - - myb3r3, putative [Ricinus communis]

Gene co-expression network

sample Hb_000252_020 Hb_000252_020 Hb_003952_090 Hb_003952_090 Hb_000252_020--Hb_003952_090 Hb_000030_040 Hb_000030_040 Hb_000252_020--Hb_000030_040 Hb_000130_040 Hb_000130_040 Hb_000252_020--Hb_000130_040 Hb_004800_080 Hb_004800_080 Hb_000252_020--Hb_004800_080 Hb_120327_010 Hb_120327_010 Hb_000252_020--Hb_120327_010 Hb_008554_130 Hb_008554_130 Hb_000252_020--Hb_008554_130 Hb_002477_280 Hb_002477_280 Hb_003952_090--Hb_002477_280 Hb_001481_090 Hb_001481_090 Hb_003952_090--Hb_001481_090 Hb_001369_220 Hb_001369_220 Hb_003952_090--Hb_001369_220 Hb_001766_110 Hb_001766_110 Hb_003952_090--Hb_001766_110 Hb_002759_150 Hb_002759_150 Hb_003952_090--Hb_002759_150 Hb_018838_030 Hb_018838_030 Hb_003952_090--Hb_018838_030 Hb_001912_100 Hb_001912_100 Hb_000030_040--Hb_001912_100 Hb_002477_030 Hb_002477_030 Hb_000030_040--Hb_002477_030 Hb_000487_290 Hb_000487_290 Hb_000030_040--Hb_000487_290 Hb_075481_030 Hb_075481_030 Hb_000030_040--Hb_075481_030 Hb_001790_020 Hb_001790_020 Hb_000030_040--Hb_001790_020 Hb_106371_010 Hb_106371_010 Hb_000030_040--Hb_106371_010 Hb_002701_040 Hb_002701_040 Hb_000130_040--Hb_002701_040 Hb_006831_040 Hb_006831_040 Hb_000130_040--Hb_006831_040 Hb_010174_110 Hb_010174_110 Hb_000130_040--Hb_010174_110 Hb_004032_380 Hb_004032_380 Hb_000130_040--Hb_004032_380 Hb_002740_110 Hb_002740_110 Hb_000130_040--Hb_002740_110 Hb_002053_080 Hb_002053_080 Hb_000130_040--Hb_002053_080 Hb_004800_080--Hb_008554_130 Hb_167498_010 Hb_167498_010 Hb_004800_080--Hb_167498_010 Hb_004800_080--Hb_120327_010 Hb_002391_310 Hb_002391_310 Hb_004800_080--Hb_002391_310 Hb_007254_070 Hb_007254_070 Hb_004800_080--Hb_007254_070 Hb_001369_730 Hb_001369_730 Hb_004800_080--Hb_001369_730 Hb_000827_070 Hb_000827_070 Hb_120327_010--Hb_000827_070 Hb_120327_010--Hb_007254_070 Hb_044728_010 Hb_044728_010 Hb_120327_010--Hb_044728_010 Hb_000225_040 Hb_000225_040 Hb_120327_010--Hb_000225_040 Hb_000107_330 Hb_000107_330 Hb_120327_010--Hb_000107_330 Hb_009767_110 Hb_009767_110 Hb_008554_130--Hb_009767_110 Hb_005496_130 Hb_005496_130 Hb_008554_130--Hb_005496_130 Hb_008554_130--Hb_044728_010 Hb_008554_130--Hb_001369_730 Hb_008554_130--Hb_167498_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
30.4053 46.6094 6.80657 14.8398 59.5744 36.0593
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
21.9018 64.1952 39.267 37.8539 28.6727

CAGE analysis