Hb_000111_080

Information

Type -
Description -
Location Contig111: 121580-125256
Sequence    

Annotation

kegg
ID rcu:RCOM_1452400
description phosphatidylinositol-4-phosphate 5-kinase, putative (EC:2.7.1.68)
nr
ID KDP40535.1
description hypothetical protein JCGZ_24534 [Jatropha curcas]
swissprot
ID Q9SFB8
description Phosphatidylinositol 4-phosphate 5-kinase 6 OS=Arabidopsis thaliana GN=PIP5K6 PE=2 SV=1
trembl
ID A0A067L7P8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24534 PE=4 SV=1
Gene Ontology
ID GO:0016324
description phosphatidylinositol 4-phosphate 5-kinase 6-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_03372: 120913-121876 , PASA_asmbl_03373: 122457-124111 , PASA_asmbl_03376: 125167-130497
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000111_080 0.0 - - hypothetical protein JCGZ_24534 [Jatropha curcas]
2 Hb_000136_120 0.0855513708 - - PREDICTED: probable strigolactone esterase D14 homolog [Jatropha curcas]
3 Hb_000167_150 0.0857275319 - - hypothetical protein POPTR_0008s03590g [Populus trichocarpa]
4 Hb_006586_060 0.0874728359 transcription factor TF Family: SBP Squamosa promoter-binding protein, putative [Ricinus communis]
5 Hb_006594_030 0.0902271294 - - -
6 Hb_102129_040 0.0931972819 - - PREDICTED: PTI1-like tyrosine-protein kinase 2 isoform X1 [Jatropha curcas]
7 Hb_000735_190 0.0950578025 - - hypothetical protein POPTR_0006s19340g [Populus trichocarpa]
8 Hb_001329_060 0.0987603743 - - Polygalacturonase precursor, putative [Ricinus communis]
9 Hb_001946_070 0.0989552633 transcription factor TF Family: ERF DNA binding protein, putative [Ricinus communis]
10 Hb_000130_340 0.0998930148 - - -
11 Hb_000243_360 0.1001371691 transcription factor TF Family: NAC PREDICTED: NAC domain-containing protein 7 isoform X1 [Vitis vinifera]
12 Hb_032880_010 0.1001467521 - - PREDICTED: beta-glucosidase 24-like [Jatropha curcas]
13 Hb_001221_550 0.1013656581 - - Corticosteroid 11-beta-dehydrogenase, putative [Ricinus communis]
14 Hb_003411_070 0.102182665 - - PREDICTED: protein NRT1/ PTR FAMILY 3.1 [Populus euphratica]
15 Hb_000751_010 0.1028902801 - - conserved hypothetical protein [Ricinus communis]
16 Hb_001153_170 0.1041517959 - - PREDICTED: protein HOTHEAD [Populus euphratica]
17 Hb_001671_070 0.1054908857 - - kinase, putative [Ricinus communis]
18 Hb_000160_260 0.1059887066 - - nutrient reservoir, putative [Ricinus communis]
19 Hb_025048_050 0.1080725847 - - PREDICTED: protein PHYTOCHROME KINASE SUBSTRATE 3 [Jatropha curcas]
20 Hb_089140_130 0.1091731457 - - hypothetical protein POPTR_0006s14510g [Populus trichocarpa]

Gene co-expression network

sample Hb_000111_080 Hb_000111_080 Hb_000136_120 Hb_000136_120 Hb_000111_080--Hb_000136_120 Hb_000167_150 Hb_000167_150 Hb_000111_080--Hb_000167_150 Hb_006586_060 Hb_006586_060 Hb_000111_080--Hb_006586_060 Hb_006594_030 Hb_006594_030 Hb_000111_080--Hb_006594_030 Hb_102129_040 Hb_102129_040 Hb_000111_080--Hb_102129_040 Hb_000735_190 Hb_000735_190 Hb_000111_080--Hb_000735_190 Hb_000136_120--Hb_000167_150 Hb_000136_120--Hb_006594_030 Hb_001946_070 Hb_001946_070 Hb_000136_120--Hb_001946_070 Hb_001153_170 Hb_001153_170 Hb_000136_120--Hb_001153_170 Hb_025048_050 Hb_025048_050 Hb_000136_120--Hb_025048_050 Hb_089140_130 Hb_089140_130 Hb_000136_120--Hb_089140_130 Hb_000167_150--Hb_006594_030 Hb_000167_150--Hb_001946_070 Hb_001329_060 Hb_001329_060 Hb_000167_150--Hb_001329_060 Hb_000167_150--Hb_006586_060 Hb_000167_150--Hb_025048_050 Hb_006586_060--Hb_102129_040 Hb_000751_010 Hb_000751_010 Hb_006586_060--Hb_000751_010 Hb_006586_060--Hb_000735_190 Hb_006586_060--Hb_000136_120 Hb_001221_550 Hb_001221_550 Hb_006586_060--Hb_001221_550 Hb_006594_030--Hb_001153_170 Hb_006594_030--Hb_089140_130 Hb_009771_010 Hb_009771_010 Hb_006594_030--Hb_009771_010 Hb_007617_030 Hb_007617_030 Hb_006594_030--Hb_007617_030 Hb_102129_040--Hb_000751_010 Hb_102900_010 Hb_102900_010 Hb_102129_040--Hb_102900_010 Hb_102129_040--Hb_001329_060 Hb_102129_040--Hb_000735_190 Hb_102129_040--Hb_000167_150 Hb_000160_260 Hb_000160_260 Hb_000735_190--Hb_000160_260 Hb_003411_070 Hb_003411_070 Hb_000735_190--Hb_003411_070 Hb_000735_190--Hb_000751_010 Hb_000735_190--Hb_000167_150
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 2.46413 0.506616 0.0189671 0.0165726
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0169313 0 0 0.824004

CAGE analysis