Hb_000084_160

Information

Type -
Description -
Location Contig84: 137513-139755
Sequence    

Annotation

kegg
ID tcc:TCM_025392
description SGNH hydrolase-type esterase superfamily protein, putative
nr
ID XP_007029519.1
description SGNH hydrolase-type esterase superfamily protein, putative [Theobroma cacao]
swissprot
ID Q9LZB2
description GDSL esterase/lipase At5g03980 OS=Arabidopsis thaliana GN=At5g03980 PE=2 SV=1
trembl
ID A0A061EYZ6
description SGNH hydrolase-type esterase superfamily protein, putative OS=Theobroma cacao GN=TCM_025392 PE=4 SV=1
Gene Ontology
ID GO:0016788
description acetylajmalan esterase-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000084_160 0.0 - - SGNH hydrolase-type esterase superfamily protein, putative [Theobroma cacao]
2 Hb_000086_230 0.127051607 - - serine/threonine-protein kinase, putative [Ricinus communis]
3 Hb_012633_040 0.1327576435 - - -
4 Hb_101733_030 0.1363140616 - - PREDICTED: uncharacterized protein At3g49055 [Jatropha curcas]
5 Hb_001828_060 0.1373299567 desease resistance Gene Name: AAA_31 nucleotide-binding protein, putative [Ricinus communis]
6 Hb_000696_290 0.1373323882 - - PREDICTED: UPF0664 stress-induced protein C29B12.11c [Jatropha curcas]
7 Hb_002814_070 0.1398565578 - - PREDICTED: uncharacterized protein LOC104877459 [Vitis vinifera]
8 Hb_055320_010 0.1402685057 - - PREDICTED: oligosaccharyltransferase complex subunit ostc [Jatropha curcas]
9 Hb_000258_260 0.1405579185 - - PREDICTED: protein HGH1 homolog [Jatropha curcas]
10 Hb_000183_090 0.1416367781 - - PREDICTED: protein EARLY FLOWERING 3 isoform X2 [Jatropha curcas]
11 Hb_003963_010 0.1424710075 - - conserved hypothetical protein [Ricinus communis]
12 Hb_000010_190 0.1467693347 - - PREDICTED: protein-L-isoaspartate O-methyltransferase 1 isoform X2 [Jatropha curcas]
13 Hb_000069_420 0.1475440508 - - Beclin-1, putative [Ricinus communis]
14 Hb_003465_030 0.1490671124 - - conserved hypothetical protein [Ricinus communis]
15 Hb_000589_260 0.1497479913 - - 3-hydroxybutyryl-CoA dehydratase, putative [Ricinus communis]
16 Hb_001017_050 0.1523581322 - - hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis]
17 Hb_004324_090 0.1536705885 - - PREDICTED: uncharacterized protein LOC105648352 isoform X1 [Jatropha curcas]
18 Hb_012490_070 0.156004476 - - conserved hypothetical protein [Ricinus communis]
19 Hb_001489_090 0.1561630669 - - PREDICTED: uncharacterized protein LOC105649775 [Jatropha curcas]
20 Hb_001723_020 0.1573778956 - - PREDICTED: nuclear export mediator factor Nemf [Jatropha curcas]

Gene co-expression network

sample Hb_000084_160 Hb_000084_160 Hb_000086_230 Hb_000086_230 Hb_000084_160--Hb_000086_230 Hb_012633_040 Hb_012633_040 Hb_000084_160--Hb_012633_040 Hb_101733_030 Hb_101733_030 Hb_000084_160--Hb_101733_030 Hb_001828_060 Hb_001828_060 Hb_000084_160--Hb_001828_060 Hb_000696_290 Hb_000696_290 Hb_000084_160--Hb_000696_290 Hb_002814_070 Hb_002814_070 Hb_000084_160--Hb_002814_070 Hb_001691_140 Hb_001691_140 Hb_000086_230--Hb_001691_140 Hb_003064_020 Hb_003064_020 Hb_000086_230--Hb_003064_020 Hb_000099_150 Hb_000099_150 Hb_000086_230--Hb_000099_150 Hb_000589_120 Hb_000589_120 Hb_000086_230--Hb_000589_120 Hb_000086_230--Hb_001828_060 Hb_003465_030 Hb_003465_030 Hb_012633_040--Hb_003465_030 Hb_000907_110 Hb_000907_110 Hb_012633_040--Hb_000907_110 Hb_000181_400 Hb_000181_400 Hb_012633_040--Hb_000181_400 Hb_007416_120 Hb_007416_120 Hb_012633_040--Hb_007416_120 Hb_000170_070 Hb_000170_070 Hb_012633_040--Hb_000170_070 Hb_000749_190 Hb_000749_190 Hb_012633_040--Hb_000749_190 Hb_007576_080 Hb_007576_080 Hb_101733_030--Hb_007576_080 Hb_101733_030--Hb_000907_110 Hb_002346_010 Hb_002346_010 Hb_101733_030--Hb_002346_010 Hb_004787_110 Hb_004787_110 Hb_101733_030--Hb_004787_110 Hb_000402_080 Hb_000402_080 Hb_101733_030--Hb_000402_080 Hb_001104_160 Hb_001104_160 Hb_101733_030--Hb_001104_160 Hb_002534_150 Hb_002534_150 Hb_001828_060--Hb_002534_150 Hb_005725_250 Hb_005725_250 Hb_001828_060--Hb_005725_250 Hb_000059_370 Hb_000059_370 Hb_001828_060--Hb_000059_370 Hb_027380_050 Hb_027380_050 Hb_001828_060--Hb_027380_050 Hb_003780_030 Hb_003780_030 Hb_001828_060--Hb_003780_030 Hb_012490_070 Hb_012490_070 Hb_001828_060--Hb_012490_070 Hb_004157_040 Hb_004157_040 Hb_000696_290--Hb_004157_040 Hb_006256_030 Hb_006256_030 Hb_000696_290--Hb_006256_030 Hb_011671_100 Hb_011671_100 Hb_000696_290--Hb_011671_100 Hb_116608_010 Hb_116608_010 Hb_000696_290--Hb_116608_010 Hb_004324_090 Hb_004324_090 Hb_000696_290--Hb_004324_090 Hb_000115_220 Hb_000115_220 Hb_000696_290--Hb_000115_220 Hb_002631_030 Hb_002631_030 Hb_002814_070--Hb_002631_030 Hb_000329_760 Hb_000329_760 Hb_002814_070--Hb_000329_760 Hb_031340_050 Hb_031340_050 Hb_002814_070--Hb_031340_050 Hb_002197_050 Hb_002197_050 Hb_002814_070--Hb_002197_050 Hb_009687_010 Hb_009687_010 Hb_002814_070--Hb_009687_010 Hb_000137_090 Hb_000137_090 Hb_002814_070--Hb_000137_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.40968 1.06582 0.649422 0.68523 1.60572 0.331067
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.6203 2.00269 1.00996 1.418 0.748646

CAGE analysis