Hb_004324_090

Information

Type -
Description -
Location Contig4324: 52092-58009
Sequence    

Annotation

kegg
ID vvi:100265382
description uncharacterized LOC100265382
nr
ID XP_012090102.1
description PREDICTED: uncharacterized protein LOC105648352 isoform X1 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JE69
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25992 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_42309: 52138-57973
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004324_090 0.0 - - PREDICTED: uncharacterized protein LOC105648352 isoform X1 [Jatropha curcas]
2 Hb_158445_010 0.0605183904 - - PREDICTED: cysteine protease ATG4-like isoform X1 [Jatropha curcas]
3 Hb_000310_020 0.0631986528 - - hypothetical protein JCGZ_20797 [Jatropha curcas]
4 Hb_163256_020 0.0646708362 - - fructokinase [Manihot esculenta]
5 Hb_000069_420 0.0662151066 - - Beclin-1, putative [Ricinus communis]
6 Hb_006615_240 0.0662576464 - - PREDICTED: uncharacterized protein LOC105640673 [Jatropha curcas]
7 Hb_000856_010 0.0720207942 - - PREDICTED: uncharacterized protein LOC105640466 [Jatropha curcas]
8 Hb_003994_260 0.0732514938 - - PREDICTED: uncharacterized protein LOC105646151 [Jatropha curcas]
9 Hb_012107_060 0.0750810511 - - hypothetical protein JCGZ_17178 [Jatropha curcas]
10 Hb_000221_190 0.0752373824 - - PREDICTED: 14-3-3-like protein [Jatropha curcas]
11 Hb_000336_150 0.0759234487 - - ribulose-5-phosphate-3-epimerase, putative [Ricinus communis]
12 Hb_010812_120 0.0809673052 - - hypothetical protein JCGZ_03293 [Jatropha curcas]
13 Hb_000010_190 0.0822806836 - - PREDICTED: protein-L-isoaspartate O-methyltransferase 1 isoform X2 [Jatropha curcas]
14 Hb_010098_050 0.0824097772 - - PREDICTED: putative deoxyribonuclease tatdn3-A [Jatropha curcas]
15 Hb_004143_150 0.0839969713 transcription factor TF Family: C2C2-GATA PREDICTED: GATA transcription factor 24-like isoform X6 [Jatropha curcas]
16 Hb_000327_060 0.0849393369 - - PREDICTED: uncharacterized protein LOC105635258 isoform X2 [Jatropha curcas]
17 Hb_001278_100 0.0856886937 - - PREDICTED: probable phosphopantothenoylcysteine decarboxylase [Jatropha curcas]
18 Hb_001470_030 0.0858137993 - - PREDICTED: MORC family CW-type zinc finger protein 3 isoform X2 [Jatropha curcas]
19 Hb_003582_060 0.0866775012 transcription factor TF Family: BBR-BPC PREDICTED: protein BASIC PENTACYSTEINE2-like isoform X1 [Jatropha curcas]
20 Hb_019280_050 0.0867277367 - - PREDICTED: protein SAWADEE HOMEODOMAIN HOMOLOG 2 [Jatropha curcas]

Gene co-expression network

sample Hb_004324_090 Hb_004324_090 Hb_158445_010 Hb_158445_010 Hb_004324_090--Hb_158445_010 Hb_000310_020 Hb_000310_020 Hb_004324_090--Hb_000310_020 Hb_163256_020 Hb_163256_020 Hb_004324_090--Hb_163256_020 Hb_000069_420 Hb_000069_420 Hb_004324_090--Hb_000069_420 Hb_006615_240 Hb_006615_240 Hb_004324_090--Hb_006615_240 Hb_000856_010 Hb_000856_010 Hb_004324_090--Hb_000856_010 Hb_000327_060 Hb_000327_060 Hb_158445_010--Hb_000327_060 Hb_005162_060 Hb_005162_060 Hb_158445_010--Hb_005162_060 Hb_004143_150 Hb_004143_150 Hb_158445_010--Hb_004143_150 Hb_158445_010--Hb_000310_020 Hb_158445_010--Hb_163256_020 Hb_000505_130 Hb_000505_130 Hb_000310_020--Hb_000505_130 Hb_000221_190 Hb_000221_190 Hb_000310_020--Hb_000221_190 Hb_000161_130 Hb_000161_130 Hb_000310_020--Hb_000161_130 Hb_000310_020--Hb_006615_240 Hb_003124_150 Hb_003124_150 Hb_000310_020--Hb_003124_150 Hb_000465_300 Hb_000465_300 Hb_163256_020--Hb_000465_300 Hb_006256_030 Hb_006256_030 Hb_163256_020--Hb_006256_030 Hb_022318_020 Hb_022318_020 Hb_163256_020--Hb_022318_020 Hb_163256_020--Hb_000310_020 Hb_004994_140 Hb_004994_140 Hb_000069_420--Hb_004994_140 Hb_003994_260 Hb_003994_260 Hb_000069_420--Hb_003994_260 Hb_005846_040 Hb_005846_040 Hb_000069_420--Hb_005846_040 Hb_000250_060 Hb_000250_060 Hb_000069_420--Hb_000250_060 Hb_001633_210 Hb_001633_210 Hb_000069_420--Hb_001633_210 Hb_003582_060 Hb_003582_060 Hb_006615_240--Hb_003582_060 Hb_010098_050 Hb_010098_050 Hb_006615_240--Hb_010098_050 Hb_000390_300 Hb_000390_300 Hb_006615_240--Hb_000390_300 Hb_004109_170 Hb_004109_170 Hb_006615_240--Hb_004109_170 Hb_000003_230 Hb_000003_230 Hb_006615_240--Hb_000003_230 Hb_001341_150 Hb_001341_150 Hb_006615_240--Hb_001341_150 Hb_012022_040 Hb_012022_040 Hb_000856_010--Hb_012022_040 Hb_000928_070 Hb_000928_070 Hb_000856_010--Hb_000928_070 Hb_005054_110 Hb_005054_110 Hb_000856_010--Hb_005054_110 Hb_004078_040 Hb_004078_040 Hb_000856_010--Hb_004078_040 Hb_000856_010--Hb_000221_190 Hb_000359_060 Hb_000359_060 Hb_000856_010--Hb_000359_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
7.6432 15.7223 12.3255 13.4389 9.56476 9.11191
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
17.8446 26.7818 17.2627 13.6318 12.2536

CAGE analysis