Hb_185839_010

Information

Type -
Description -
Location Contig185839: 6656-12499
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_185839_010 0.0 - - -
2 Hb_180367_010 0.2094313927 - - PREDICTED: uncharacterized protein LOC105794100 [Gossypium raimondii]
3 Hb_020250_020 0.210172737 - - PREDICTED: uncharacterized protein LOC105775392, partial [Gossypium raimondii]
4 Hb_017225_010 0.2123174233 - - PREDICTED: nodulation receptor kinase-like [Jatropha curcas]
5 Hb_165100_010 0.213492076 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103696607 [Phoenix dactylifera]
6 Hb_003739_040 0.2142025443 - - RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc finger, CCHC-type; Peptidase aspartic, active site; Polynucleotidyl transferase, Ribonuclease H fold [Medicago truncatula]
7 Hb_003567_020 0.2174315433 - - conserved hypothetical protein [Ricinus communis]
8 Hb_003772_010 0.2278158422 - - polyprotein [Oryza australiensis]
9 Hb_017415_010 0.2282800658 - - hypothetical protein CICLE_v10033628mg, partial [Citrus clementina]
10 Hb_006778_010 0.2294245625 - - PREDICTED: uncharacterized protein LOC105803109 [Gossypium raimondii]
11 Hb_042463_070 0.2308281395 - - 60S ribosomal protein L16, putative [Ricinus communis]
12 Hb_000764_050 0.2369440501 - - hypothetical protein JCGZ_09935 [Jatropha curcas]
13 Hb_012330_030 0.241013963 - - conserved hypothetical protein [Ricinus communis]
14 Hb_000585_090 0.2421599194 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC105114407 [Populus euphratica]
15 Hb_000051_100 0.2422005491 - - hypothetical protein MIMGU_mgv1a025286mg [Erythranthe guttata]
16 Hb_003157_020 0.2423872059 - - PREDICTED: uncharacterized protein LOC104809111 [Tarenaya hassleriana]
17 Hb_006040_010 0.246336193 - - cytochrome c oxidase subunit 3 (mitochondrion) [Hevea brasiliensis]
18 Hb_000752_080 0.2483780924 - - -
19 Hb_000907_050 0.2484361229 - - -
20 Hb_001401_030 0.2492396608 - - PREDICTED: uncharacterized protein LOC105649622 [Jatropha curcas]

Gene co-expression network

sample Hb_185839_010 Hb_185839_010 Hb_180367_010 Hb_180367_010 Hb_185839_010--Hb_180367_010 Hb_020250_020 Hb_020250_020 Hb_185839_010--Hb_020250_020 Hb_017225_010 Hb_017225_010 Hb_185839_010--Hb_017225_010 Hb_165100_010 Hb_165100_010 Hb_185839_010--Hb_165100_010 Hb_003739_040 Hb_003739_040 Hb_185839_010--Hb_003739_040 Hb_003567_020 Hb_003567_020 Hb_185839_010--Hb_003567_020 Hb_180367_010--Hb_003567_020 Hb_180367_010--Hb_003739_040 Hb_017415_010 Hb_017415_010 Hb_180367_010--Hb_017415_010 Hb_003157_020 Hb_003157_020 Hb_180367_010--Hb_003157_020 Hb_002149_030 Hb_002149_030 Hb_180367_010--Hb_002149_030 Hb_164415_010 Hb_164415_010 Hb_180367_010--Hb_164415_010 Hb_003406_020 Hb_003406_020 Hb_020250_020--Hb_003406_020 Hb_068031_010 Hb_068031_010 Hb_020250_020--Hb_068031_010 Hb_001570_010 Hb_001570_010 Hb_020250_020--Hb_001570_010 Hb_094917_010 Hb_094917_010 Hb_020250_020--Hb_094917_010 Hb_020250_020--Hb_165100_010 Hb_028248_010 Hb_028248_010 Hb_017225_010--Hb_028248_010 Hb_011716_120 Hb_011716_120 Hb_017225_010--Hb_011716_120 Hb_006474_010 Hb_006474_010 Hb_017225_010--Hb_006474_010 Hb_002760_020 Hb_002760_020 Hb_017225_010--Hb_002760_020 Hb_122028_010 Hb_122028_010 Hb_017225_010--Hb_122028_010 Hb_085793_010 Hb_085793_010 Hb_165100_010--Hb_085793_010 Hb_003205_040 Hb_003205_040 Hb_165100_010--Hb_003205_040 Hb_000043_040 Hb_000043_040 Hb_165100_010--Hb_000043_040 Hb_066206_010 Hb_066206_010 Hb_165100_010--Hb_066206_010 Hb_000574_290 Hb_000574_290 Hb_165100_010--Hb_000574_290 Hb_165100_010--Hb_028248_010 Hb_003739_040--Hb_003567_020 Hb_006599_040 Hb_006599_040 Hb_003739_040--Hb_006599_040 Hb_004145_030 Hb_004145_030 Hb_003739_040--Hb_004145_030 Hb_174010_030 Hb_174010_030 Hb_003739_040--Hb_174010_030 Hb_000777_010 Hb_000777_010 Hb_003739_040--Hb_000777_010 Hb_003567_020--Hb_017415_010 Hb_121041_010 Hb_121041_010 Hb_003567_020--Hb_121041_010 Hb_003567_020--Hb_002149_030 Hb_158203_010 Hb_158203_010 Hb_003567_020--Hb_158203_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0488619 0 0 0.0357281 0.0725581 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0574003 1.10203

CAGE analysis