Hb_169630_010

Information

Type -
Description -
Location Contig169630: 137-648
Sequence    

Annotation

kegg
ID rcu:RCOM_0817130
description serine/threonine-protein kinase bri1, putative (EC:1.3.1.74)
nr
ID XP_002518311.1
description serine/threonine-protein kinase bri1, putative [Ricinus communis]
swissprot
ID Q9SHI3
description Receptor-like protein 2 OS=Arabidopsis thaliana GN=RLP2 PE=2 SV=1
trembl
ID B9RX42
description Serine/threonine-protein kinase bri1, putative OS=Ricinus communis GN=RCOM_0817130 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_169630_010 0.0 - - serine/threonine-protein kinase bri1, putative [Ricinus communis]
2 Hb_004770_060 0.242306762 - - unnamed protein product, partial [Coffea canephora]
3 Hb_003455_010 0.2676424547 - - hypothetical protein POPTR_0009s14040g [Populus trichocarpa]
4 Hb_030885_020 0.3035215886 - - -
5 Hb_172572_010 0.3051209789 - - PREDICTED: ubiquitin thioesterase otubain-like [Jatropha curcas]
6 Hb_020532_010 0.3071649763 - - PREDICTED: uncharacterized protein LOC105775165 [Gossypium raimondii]
7 Hb_002820_130 0.3239125049 - - -
8 Hb_036026_010 0.3283460828 transcription factor TF Family: FAR1 FAR-RED IMPAIRED RESPONSE [Medicago truncatula]
9 Hb_011381_090 0.3309841999 - - Protein ABC1, mitochondrial precursor, putative [Ricinus communis]
10 Hb_005318_010 0.3321120716 - - hypothetical protein POPTR_0012s15190g, partial [Populus trichocarpa]
11 Hb_000953_120 0.3330268638 - - -
12 Hb_000130_170 0.3349945355 - - -
13 Hb_000025_080 0.3361583872 - - -
14 Hb_002942_180 0.3367533422 - - phosphate transporter [Manihot esculenta]
15 Hb_000270_540 0.3378862425 - - hypothetical protein JCGZ_11527 [Jatropha curcas]
16 Hb_005597_010 0.3392266054 - - -
17 Hb_005854_050 0.3442909927 - - conserved hypothetical protein [Ricinus communis]
18 Hb_006971_080 0.3472545339 - - hypothetical protein PRUPE_ppa015000mg [Prunus persica]
19 Hb_002267_120 0.3476619203 - - hypothetical protein B456_009G136300 [Gossypium raimondii]
20 Hb_017014_020 0.3497588588 - - -

Gene co-expression network

sample Hb_169630_010 Hb_169630_010 Hb_004770_060 Hb_004770_060 Hb_169630_010--Hb_004770_060 Hb_003455_010 Hb_003455_010 Hb_169630_010--Hb_003455_010 Hb_030885_020 Hb_030885_020 Hb_169630_010--Hb_030885_020 Hb_172572_010 Hb_172572_010 Hb_169630_010--Hb_172572_010 Hb_020532_010 Hb_020532_010 Hb_169630_010--Hb_020532_010 Hb_002820_130 Hb_002820_130 Hb_169630_010--Hb_002820_130 Hb_004770_060--Hb_030885_020 Hb_004770_060--Hb_020532_010 Hb_004770_060--Hb_003455_010 Hb_002942_180 Hb_002942_180 Hb_004770_060--Hb_002942_180 Hb_005597_010 Hb_005597_010 Hb_004770_060--Hb_005597_010 Hb_002267_120 Hb_002267_120 Hb_003455_010--Hb_002267_120 Hb_006971_080 Hb_006971_080 Hb_003455_010--Hb_006971_080 Hb_005854_050 Hb_005854_050 Hb_003455_010--Hb_005854_050 Hb_003455_010--Hb_030885_020 Hb_082960_020 Hb_082960_020 Hb_003455_010--Hb_082960_020 Hb_154381_010 Hb_154381_010 Hb_030885_020--Hb_154381_010 Hb_003551_040 Hb_003551_040 Hb_030885_020--Hb_003551_040 Hb_030885_020--Hb_005597_010 Hb_060585_010 Hb_060585_010 Hb_030885_020--Hb_060585_010 Hb_030885_020--Hb_020532_010 Hb_094437_010 Hb_094437_010 Hb_172572_010--Hb_094437_010 Hb_036026_010 Hb_036026_010 Hb_172572_010--Hb_036026_010 Hb_000915_150 Hb_000915_150 Hb_172572_010--Hb_000915_150 Hb_172572_010--Hb_154381_010 Hb_172572_010--Hb_003551_040 Hb_010534_050 Hb_010534_050 Hb_172572_010--Hb_010534_050 Hb_020532_010--Hb_002942_180 Hb_094132_010 Hb_094132_010 Hb_020532_010--Hb_094132_010 Hb_103093_010 Hb_103093_010 Hb_020532_010--Hb_103093_010 Hb_000193_030 Hb_000193_030 Hb_020532_010--Hb_000193_030 Hb_021068_030 Hb_021068_030 Hb_020532_010--Hb_021068_030 Hb_097783_010 Hb_097783_010 Hb_002820_130--Hb_097783_010 Hb_007545_200 Hb_007545_200 Hb_002820_130--Hb_007545_200 Hb_104169_010 Hb_104169_010 Hb_002820_130--Hb_104169_010 Hb_072290_010 Hb_072290_010 Hb_002820_130--Hb_072290_010 Hb_133648_010 Hb_133648_010 Hb_002820_130--Hb_133648_010 Hb_011381_090 Hb_011381_090 Hb_002820_130--Hb_011381_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0705739 0 0 0.312763 0 0.164278
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.110205 0

CAGE analysis