Hb_156947_010

Information

Type -
Description -
Location Contig156947: 5137-6784
Sequence    

Annotation

kegg
ID sot:102604876
description probable LRR receptor-like serine/threonine-protein kinase At3g47570-like
nr
ID ACI05918.1
description kinase-like protein pac.x.7.4, partial [Platanus x acerifolia]
swissprot
ID -
description -
trembl
ID B6D3M1
description Kinase-like protein pac.x.7.4 (Fragment) OS=Platanus acerifolia PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_156947_010 0.0 - - kinase-like protein pac.x.7.4, partial [Platanus x acerifolia]
2 Hb_009686_030 0.0530834039 - - -
3 Hb_002701_240 0.0699078113 - - PREDICTED: putative DNA helicase INO80 [Jatropha curcas]
4 Hb_004375_100 0.0722741075 - - PREDICTED: 60S ribosomal protein L19-1 [Jatropha curcas]
5 Hb_001279_360 0.0733425395 - - protein with unknown function [Ricinus communis]
6 Hb_010068_020 0.075923105 - - PREDICTED: uncharacterized protein LOC105632966 [Jatropha curcas]
7 Hb_008878_030 0.0767056448 - - PREDICTED: uncharacterized protein At1g10890-like [Musa acuminata subsp. malaccensis]
8 Hb_012753_160 0.0819542234 - - ara4-interacting protein, putative [Ricinus communis]
9 Hb_012675_060 0.0826464581 - - hypothetical protein PRUPE_ppa007715mg [Prunus persica]
10 Hb_003734_140 0.0834463742 - - conserved hypothetical protein [Ricinus communis]
11 Hb_010080_090 0.0867605059 - - PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2 [Jatropha curcas]
12 Hb_005463_040 0.0872149688 - - signal transducer, putative [Ricinus communis]
13 Hb_143766_050 0.0900126139 - - PREDICTED: 40S ribosomal protein S15a-5-like [Populus euphratica]
14 Hb_005181_030 0.0900482089 - - PREDICTED: huntingtin-interacting protein K [Jatropha curcas]
15 Hb_000384_100 0.0915778326 - - hydrolase, putative [Ricinus communis]
16 Hb_000270_370 0.0934859573 - - Uncharacterized protein TCM_011954 [Theobroma cacao]
17 Hb_002925_030 0.095477348 - - 40S ribosomal protein S16B [Hevea brasiliensis]
18 Hb_001292_020 0.0955137052 - - PREDICTED: keratin, type II cytoskeletal 5 isoform X1 [Sesamum indicum]
19 Hb_004586_320 0.0956118791 - - PREDICTED: bet1-like protein At4g14600 [Jatropha curcas]
20 Hb_002918_200 0.0967386079 - - -

Gene co-expression network

sample Hb_156947_010 Hb_156947_010 Hb_009686_030 Hb_009686_030 Hb_156947_010--Hb_009686_030 Hb_002701_240 Hb_002701_240 Hb_156947_010--Hb_002701_240 Hb_004375_100 Hb_004375_100 Hb_156947_010--Hb_004375_100 Hb_001279_360 Hb_001279_360 Hb_156947_010--Hb_001279_360 Hb_010068_020 Hb_010068_020 Hb_156947_010--Hb_010068_020 Hb_008878_030 Hb_008878_030 Hb_156947_010--Hb_008878_030 Hb_009686_030--Hb_008878_030 Hb_143766_050 Hb_143766_050 Hb_009686_030--Hb_143766_050 Hb_002686_020 Hb_002686_020 Hb_009686_030--Hb_002686_020 Hb_001540_010 Hb_001540_010 Hb_009686_030--Hb_001540_010 Hb_019253_030 Hb_019253_030 Hb_009686_030--Hb_019253_030 Hb_002701_240--Hb_004375_100 Hb_011150_010 Hb_011150_010 Hb_002701_240--Hb_011150_010 Hb_005618_140 Hb_005618_140 Hb_002701_240--Hb_005618_140 Hb_027073_040 Hb_027073_040 Hb_002701_240--Hb_027073_040 Hb_002701_240--Hb_010068_020 Hb_004375_100--Hb_010068_020 Hb_002713_070 Hb_002713_070 Hb_004375_100--Hb_002713_070 Hb_001814_050 Hb_001814_050 Hb_004375_100--Hb_001814_050 Hb_001505_020 Hb_001505_020 Hb_004375_100--Hb_001505_020 Hb_148200_010 Hb_148200_010 Hb_001279_360--Hb_148200_010 Hb_017948_010 Hb_017948_010 Hb_001279_360--Hb_017948_010 Hb_003053_030 Hb_003053_030 Hb_001279_360--Hb_003053_030 Hb_005181_030 Hb_005181_030 Hb_001279_360--Hb_005181_030 Hb_001433_050 Hb_001433_050 Hb_001279_360--Hb_001433_050 Hb_002056_050 Hb_002056_050 Hb_010068_020--Hb_002056_050 Hb_000384_100 Hb_000384_100 Hb_010068_020--Hb_000384_100 Hb_002043_130 Hb_002043_130 Hb_010068_020--Hb_002043_130 Hb_004216_050 Hb_004216_050 Hb_010068_020--Hb_004216_050 Hb_004157_030 Hb_004157_030 Hb_010068_020--Hb_004157_030 Hb_000331_080 Hb_000331_080 Hb_008878_030--Hb_000331_080 Hb_003050_080 Hb_003050_080 Hb_008878_030--Hb_003050_080 Hb_008878_030--Hb_002686_020 Hb_000832_140 Hb_000832_140 Hb_008878_030--Hb_000832_140 Hb_004048_110 Hb_004048_110 Hb_008878_030--Hb_004048_110 Hb_004837_140 Hb_004837_140 Hb_008878_030--Hb_004837_140
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.05825 0.454083 0.926332 0.813299 1.66894 1.6582
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
2.65237 4.82596 2.56474 2.05642 1.06652

CAGE analysis