Hb_093432_010

Information

Type -
Description -
Location Contig93432: 15355-25327
Sequence    

Annotation

kegg
ID tcc:TCM_007958
description Galacturonosyltransferase 10
nr
ID XP_012088353.1
description PREDICTED: probable galacturonosyltransferase 10 [Jatropha curcas]
swissprot
ID Q9SKT6
description Probable galacturonosyltransferase 10 OS=Arabidopsis thaliana GN=GAUT10 PE=2 SV=2
trembl
ID A0A067JXE1
description Hexosyltransferase OS=Jatropha curcas GN=JCGZ_25846 PE=3 SV=1
Gene Ontology
ID GO:0047262
description probable galacturonosyltransferase 10

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_62955: 15760-23806
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_093432_010 0.0 - - PREDICTED: probable galacturonosyltransferase 10 [Jatropha curcas]
2 Hb_009969_030 0.0542428773 - - PREDICTED: argininosuccinate synthase, chloroplastic [Jatropha curcas]
3 Hb_000755_030 0.0702771812 - - PREDICTED: uncharacterized protein LOC105640834 [Jatropha curcas]
4 Hb_003966_030 0.0874357228 - - PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like isoform X7 [Jatropha curcas]
5 Hb_000283_070 0.0877173622 - - PREDICTED: T-complex protein 1 subunit delta [Jatropha curcas]
6 Hb_000574_100 0.0899861419 - - DEAD-box protein abstrakt [Populus trichocarpa]
7 Hb_003124_130 0.0936389797 - - PREDICTED: KH domain-containing protein At4g18375 isoform X1 [Jatropha curcas]
8 Hb_000645_120 0.0938316535 - - PREDICTED: ubiquitin-conjugating enzyme E2 32 [Jatropha curcas]
9 Hb_001377_070 0.0963198954 - - conserved hypothetical protein [Ricinus communis]
10 Hb_004102_140 0.0987651399 - - conserved hypothetical protein [Ricinus communis]
11 Hb_000084_250 0.0987824646 - - nucleolar phosphoprotein, putative [Ricinus communis]
12 Hb_000347_130 0.098913491 - - PREDICTED: nuclear pore complex protein NUP107 [Jatropha curcas]
13 Hb_011310_210 0.0997121975 - - PREDICTED: serine/threonine-protein kinase PRP4 homolog [Jatropha curcas]
14 Hb_000465_170 0.0999125664 transcription factor TF Family: MYB-related PREDICTED: transcription factor MYB1R1 [Jatropha curcas]
15 Hb_003488_030 0.1001050564 - - PREDICTED: protein CPR-5 [Jatropha curcas]
16 Hb_001797_050 0.1005635784 transcription factor TF Family: FAR1 PREDICTED: protein FAR1-RELATED SEQUENCE 3-like isoform X1 [Jatropha curcas]
17 Hb_000680_090 0.1007590726 - - Protein SEY1, putative [Ricinus communis]
18 Hb_002304_090 0.1010319338 - - PREDICTED: probable ATP-dependent RNA helicase DHX35 isoform X1 [Jatropha curcas]
19 Hb_003044_020 0.1012472473 - - PREDICTED: uncharacterized protein LOC105641479 [Jatropha curcas]
20 Hb_000077_230 0.1018527222 - - PREDICTED: uncharacterized protein LOC105646947 [Jatropha curcas]

Gene co-expression network

sample Hb_093432_010 Hb_093432_010 Hb_009969_030 Hb_009969_030 Hb_093432_010--Hb_009969_030 Hb_000755_030 Hb_000755_030 Hb_093432_010--Hb_000755_030 Hb_003966_030 Hb_003966_030 Hb_093432_010--Hb_003966_030 Hb_000283_070 Hb_000283_070 Hb_093432_010--Hb_000283_070 Hb_000574_100 Hb_000574_100 Hb_093432_010--Hb_000574_100 Hb_003124_130 Hb_003124_130 Hb_093432_010--Hb_003124_130 Hb_033187_050 Hb_033187_050 Hb_009969_030--Hb_033187_050 Hb_000347_130 Hb_000347_130 Hb_009969_030--Hb_000347_130 Hb_009969_030--Hb_000755_030 Hb_009969_030--Hb_003124_130 Hb_009969_030--Hb_000283_070 Hb_006951_020 Hb_006951_020 Hb_000755_030--Hb_006951_020 Hb_000645_120 Hb_000645_120 Hb_000755_030--Hb_000645_120 Hb_000755_030--Hb_033187_050 Hb_011310_210 Hb_011310_210 Hb_000755_030--Hb_011310_210 Hb_003362_070 Hb_003362_070 Hb_003966_030--Hb_003362_070 Hb_004102_140 Hb_004102_140 Hb_003966_030--Hb_004102_140 Hb_001617_060 Hb_001617_060 Hb_003966_030--Hb_001617_060 Hb_000613_080 Hb_000613_080 Hb_003966_030--Hb_000613_080 Hb_003044_020 Hb_003044_020 Hb_003966_030--Hb_003044_020 Hb_003966_030--Hb_000347_130 Hb_000107_500 Hb_000107_500 Hb_000283_070--Hb_000107_500 Hb_000283_070--Hb_000645_120 Hb_006831_110 Hb_006831_110 Hb_000283_070--Hb_006831_110 Hb_002255_050 Hb_002255_050 Hb_000283_070--Hb_002255_050 Hb_003428_070 Hb_003428_070 Hb_000283_070--Hb_003428_070 Hb_001797_050 Hb_001797_050 Hb_000283_070--Hb_001797_050 Hb_002615_090 Hb_002615_090 Hb_000574_100--Hb_002615_090 Hb_000922_370 Hb_000922_370 Hb_000574_100--Hb_000922_370 Hb_001472_090 Hb_001472_090 Hb_000574_100--Hb_001472_090 Hb_000941_130 Hb_000941_130 Hb_000574_100--Hb_000941_130 Hb_000574_070 Hb_000574_070 Hb_000574_100--Hb_000574_070 Hb_000878_180 Hb_000878_180 Hb_000574_100--Hb_000878_180 Hb_000567_010 Hb_000567_010 Hb_003124_130--Hb_000567_010 Hb_000796_190 Hb_000796_190 Hb_003124_130--Hb_000796_190 Hb_147737_010 Hb_147737_010 Hb_003124_130--Hb_147737_010 Hb_001454_320 Hb_001454_320 Hb_003124_130--Hb_001454_320 Hb_000158_130 Hb_000158_130 Hb_003124_130--Hb_000158_130 Hb_000160_290 Hb_000160_290 Hb_003124_130--Hb_000160_290
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
26.3142 29.4825 17.6044 17.2355 28.8644 54.5613
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
14.9495 11.3524 25.8886 15.232 12.0093

CAGE analysis