Hb_084495_010

Information

Type -
Description -
Location Contig84495: 415-2533
Sequence    

Annotation

kegg
ID egr:104447024
description G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5
nr
ID XP_010059113.1
description PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 [Eucalyptus grandis]
swissprot
ID Q39688
description Epidermis-specific secreted glycoprotein EP1 OS=Daucus carota GN=EP1 PE=1 SV=1
trembl
ID A0A067JEE7
description Serine/threonine-protein kinase OS=Jatropha curcas GN=JCGZ_21614 PE=3 SV=1
Gene Ontology
ID GO:0000166
description g-type lectin s-receptor-like serine threonine-protein kinase sd2-5

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_084495_010 0.0 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 [Eucalyptus grandis]
2 Hb_099198_010 0.0187304102 - - PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase At2g25790 isoform X2 [Nicotiana tomentosiformis]
3 Hb_003121_020 0.0345943299 - - secretory peroxidase PX3 [Manihot esculenta]
4 Hb_014113_010 0.0761367453 - - PREDICTED: ent-copalyl diphosphate synthase, chloroplastic [Jatropha curcas]
5 Hb_010839_070 0.1234141745 - - uncharacterized protein LOC100810725 [Glycine max]
6 Hb_000640_270 0.1388873031 - - PREDICTED: LOW QUALITY PROTEIN: probable pectinesterase 30 [Jatropha curcas]
7 Hb_000407_110 0.1420168815 - - ripening-induced ACC oxidase [Carica papaya]
8 Hb_183700_010 0.1451373777 - - UDP-glucosyltransferase, putative [Ricinus communis]
9 Hb_001571_010 0.1454541365 - - hypothetical protein JCGZ_15779 [Jatropha curcas]
10 Hb_003581_240 0.1458685131 transcription factor TF Family: WRKY WRKY transcription factor, putative [Ricinus communis]
11 Hb_000327_300 0.150429647 - - PREDICTED: ABC transporter G family member 6-like [Jatropha curcas]
12 Hb_004586_080 0.1511584831 - - hypothetical protein POPTR_0002s10520g [Populus trichocarpa]
13 Hb_117464_010 0.1623037944 - - PREDICTED: flavone 3'-O-methyltransferase 1-like [Jatropha curcas]
14 Hb_006919_010 0.1628923751 - - PREDICTED: putative wall-associated receptor kinase-like 16 [Vitis vinifera]
15 Hb_002435_080 0.1638051423 - - conserved hypothetical protein [Ricinus communis]
16 Hb_008080_040 0.1650009373 - - hypothetical protein EUGRSUZ_D00834 [Eucalyptus grandis]
17 Hb_007483_030 0.1658121038 - - -
18 Hb_014387_040 0.166698293 - - PREDICTED: uncharacterized protein LOC105636953 [Jatropha curcas]
19 Hb_001652_050 0.1682051426 - - -
20 Hb_008160_020 0.1683705672 - - PREDICTED: AT-hook motif nuclear-localized protein 23-like isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_084495_010 Hb_084495_010 Hb_099198_010 Hb_099198_010 Hb_084495_010--Hb_099198_010 Hb_003121_020 Hb_003121_020 Hb_084495_010--Hb_003121_020 Hb_014113_010 Hb_014113_010 Hb_084495_010--Hb_014113_010 Hb_010839_070 Hb_010839_070 Hb_084495_010--Hb_010839_070 Hb_000640_270 Hb_000640_270 Hb_084495_010--Hb_000640_270 Hb_000407_110 Hb_000407_110 Hb_084495_010--Hb_000407_110 Hb_099198_010--Hb_003121_020 Hb_099198_010--Hb_014113_010 Hb_099198_010--Hb_010839_070 Hb_099198_010--Hb_000407_110 Hb_001652_050 Hb_001652_050 Hb_099198_010--Hb_001652_050 Hb_003121_020--Hb_014113_010 Hb_003121_020--Hb_010839_070 Hb_001571_010 Hb_001571_010 Hb_003121_020--Hb_001571_010 Hb_003121_020--Hb_000640_270 Hb_183700_010 Hb_183700_010 Hb_014113_010--Hb_183700_010 Hb_002766_040 Hb_002766_040 Hb_014113_010--Hb_002766_040 Hb_003581_240 Hb_003581_240 Hb_014113_010--Hb_003581_240 Hb_010839_070--Hb_000640_270 Hb_117464_010 Hb_117464_010 Hb_010839_070--Hb_117464_010 Hb_008160_020 Hb_008160_020 Hb_010839_070--Hb_008160_020 Hb_010839_070--Hb_001571_010 Hb_071381_010 Hb_071381_010 Hb_010839_070--Hb_071381_010 Hb_001081_020 Hb_001081_020 Hb_010839_070--Hb_001081_020 Hb_000640_270--Hb_117464_010 Hb_000640_270--Hb_008160_020 Hb_000640_270--Hb_001081_020 Hb_000640_270--Hb_071381_010 Hb_039342_030 Hb_039342_030 Hb_000640_270--Hb_039342_030 Hb_006919_010 Hb_006919_010 Hb_000407_110--Hb_006919_010 Hb_001609_080 Hb_001609_080 Hb_000407_110--Hb_001609_080 Hb_007483_030 Hb_007483_030 Hb_000407_110--Hb_007483_030 Hb_008080_040 Hb_008080_040 Hb_000407_110--Hb_008080_040 Hb_005653_100 Hb_005653_100 Hb_000407_110--Hb_005653_100 Hb_004586_080 Hb_004586_080 Hb_000407_110--Hb_004586_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0545517 0.0449213 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.245663 0

CAGE analysis