Hb_078185_010

Information

Type -
Description -
Location Contig78185: 1-567
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_078185_010 0.0 - - -
2 Hb_004784_020 0.0746056111 - - PREDICTED: uncharacterized protein LOC105636452 [Jatropha curcas]
3 Hb_001817_090 0.088899865 - - PREDICTED: bet1-like SNARE 1-1 [Jatropha curcas]
4 Hb_002289_120 0.0927829228 - - PREDICTED: uncharacterized protein LOC105645218 isoform X2 [Jatropha curcas]
5 Hb_031089_040 0.0943121052 - - thioredoxin H-type 1 [Hevea brasiliensis]
6 Hb_004306_020 0.0953839201 - - PREDICTED: ankyrin repeat and SAM domain-containing protein 6 [Jatropha curcas]
7 Hb_005278_020 0.0961383178 - - PREDICTED: sorcin-like [Jatropha curcas]
8 Hb_002207_110 0.0970317653 - - -
9 Hb_000679_300 0.0992136409 - - PREDICTED: uncharacterized protein LOC105637628 isoform X2 [Jatropha curcas]
10 Hb_003878_010 0.1012633256 - - PREDICTED: uncharacterized protein LOC105632145 [Jatropha curcas]
11 Hb_003536_110 0.1040518157 - - PREDICTED: probable small nuclear ribonucleoprotein F [Jatropha curcas]
12 Hb_001699_040 0.1040691258 - - PREDICTED: uncharacterized protein LOC105636529 isoform X2 [Jatropha curcas]
13 Hb_005667_040 0.1041294869 - - PREDICTED: trafficking protein particle complex subunit 5 [Jatropha curcas]
14 Hb_010180_010 0.104921032 - - PREDICTED: uncharacterized protein LOC105631104 [Jatropha curcas]
15 Hb_005045_060 0.1054183303 - - PREDICTED: uncharacterized protein At2g39795, mitochondrial [Jatropha curcas]
16 Hb_093666_020 0.1058127468 - - PREDICTED: 60S ribosomal protein L7-2-like [Jatropha curcas]
17 Hb_026314_020 0.1071069845 - - hypothetical protein POPTR_0019s10050g [Populus trichocarpa]
18 Hb_007432_080 0.1083447689 - - PREDICTED: mannose-6-phosphate isomerase 1-like [Jatropha curcas]
19 Hb_000505_140 0.1083742635 - - PREDICTED: actin-related protein 2/3 complex subunit 3 [Populus euphratica]
20 Hb_004502_020 0.1087720004 - - PREDICTED: DNA-directed RNA polymerase II subunit 4 [Jatropha curcas]

Gene co-expression network

sample Hb_078185_010 Hb_078185_010 Hb_004784_020 Hb_004784_020 Hb_078185_010--Hb_004784_020 Hb_001817_090 Hb_001817_090 Hb_078185_010--Hb_001817_090 Hb_002289_120 Hb_002289_120 Hb_078185_010--Hb_002289_120 Hb_031089_040 Hb_031089_040 Hb_078185_010--Hb_031089_040 Hb_004306_020 Hb_004306_020 Hb_078185_010--Hb_004306_020 Hb_005278_020 Hb_005278_020 Hb_078185_010--Hb_005278_020 Hb_066768_010 Hb_066768_010 Hb_004784_020--Hb_066768_010 Hb_001047_240 Hb_001047_240 Hb_004784_020--Hb_001047_240 Hb_004784_020--Hb_031089_040 Hb_004784_020--Hb_005278_020 Hb_019762_020 Hb_019762_020 Hb_004784_020--Hb_019762_020 Hb_005045_060 Hb_005045_060 Hb_001817_090--Hb_005045_060 Hb_033594_110 Hb_033594_110 Hb_001817_090--Hb_033594_110 Hb_000457_110 Hb_000457_110 Hb_001817_090--Hb_000457_110 Hb_165132_010 Hb_165132_010 Hb_001817_090--Hb_165132_010 Hb_145880_030 Hb_145880_030 Hb_001817_090--Hb_145880_030 Hb_002811_260 Hb_002811_260 Hb_001817_090--Hb_002811_260 Hb_001814_070 Hb_001814_070 Hb_002289_120--Hb_001814_070 Hb_000152_420 Hb_000152_420 Hb_002289_120--Hb_000152_420 Hb_001369_640 Hb_001369_640 Hb_002289_120--Hb_001369_640 Hb_128048_010 Hb_128048_010 Hb_002289_120--Hb_128048_010 Hb_019249_010 Hb_019249_010 Hb_002289_120--Hb_019249_010 Hb_003878_010 Hb_003878_010 Hb_002289_120--Hb_003878_010 Hb_002207_110 Hb_002207_110 Hb_031089_040--Hb_002207_110 Hb_031089_040--Hb_066768_010 Hb_002296_040 Hb_002296_040 Hb_031089_040--Hb_002296_040 Hb_004502_020 Hb_004502_020 Hb_031089_040--Hb_004502_020 Hb_000003_730 Hb_000003_730 Hb_031089_040--Hb_000003_730 Hb_010180_020 Hb_010180_020 Hb_004306_020--Hb_010180_020 Hb_010180_010 Hb_010180_010 Hb_004306_020--Hb_010180_010 Hb_004545_060 Hb_004545_060 Hb_004306_020--Hb_004545_060 Hb_004306_020--Hb_002207_110 Hb_000024_080 Hb_000024_080 Hb_004306_020--Hb_000024_080 Hb_005686_060 Hb_005686_060 Hb_004306_020--Hb_005686_060 Hb_026314_020 Hb_026314_020 Hb_005278_020--Hb_026314_020 Hb_012022_120 Hb_012022_120 Hb_005278_020--Hb_012022_120 Hb_017413_010 Hb_017413_010 Hb_005278_020--Hb_017413_010 Hb_001016_030 Hb_001016_030 Hb_005278_020--Hb_001016_030 Hb_001842_040 Hb_001842_040 Hb_005278_020--Hb_001842_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
3.41398 1.04091 2.34534 5.84202 3.87782 5.30839
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
5.56867 7.56633 2.76236 1.63336 1.0873

CAGE analysis