Hb_070277_010

Information

Type -
Description -
Location Contig70277: 155-1518
Sequence    

Annotation

kegg
ID rcu:RCOM_0291950
description purine transporter, putative
nr
ID XP_012069191.1
description PREDICTED: purine permease 3-like [Jatropha curcas]
swissprot
ID Q9FZ95
description Purine permease 3 OS=Arabidopsis thaliana GN=PUP3 PE=2 SV=1
trembl
ID A0A067KXR2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24941 PE=4 SV=1
Gene Ontology
ID GO:0016021
description purine permease 3-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_070277_010 0.0 - - PREDICTED: purine permease 3-like [Jatropha curcas]
2 Hb_003052_200 0.1727269479 - - hypothetical protein POPTR_0010s14360g [Populus trichocarpa]
3 Hb_004195_110 0.1976397097 - - hypothetical protein JCGZ_24010 [Jatropha curcas]
4 Hb_000106_070 0.2039272303 - - PREDICTED: protein NUCLEAR FUSION DEFECTIVE 4 [Jatropha curcas]
5 Hb_050399_010 0.2067636133 - - PREDICTED: protein LYK5-like [Jatropha curcas]
6 Hb_000670_110 0.2078504713 - - l-asparaginase, putative [Ricinus communis]
7 Hb_002304_140 0.219035729 - - ring finger protein, putative [Ricinus communis]
8 Hb_000367_310 0.2225359158 - - Brassinosteroid LRR receptor kinase precursor, putative [Ricinus communis]
9 Hb_000300_130 0.2290031195 transcription factor TF Family: MYB PREDICTED: uncharacterized protein LOC105141503 [Populus euphratica]
10 Hb_000928_040 0.2355317997 - - cytochrome P450, putative [Ricinus communis]
11 Hb_000057_010 0.242387332 - - PREDICTED: probable protein phosphatase 2C 59 [Jatropha curcas]
12 Hb_000645_210 0.2438434581 transcription factor TF Family: CAMTA PREDICTED: calmodulin-binding transcription activator 5-like isoform X2 [Jatropha curcas]
13 Hb_001148_030 0.2440512735 - - -
14 Hb_009545_020 0.2455222436 - - PREDICTED: uncharacterized protein LOC105632008 [Jatropha curcas]
15 Hb_003119_070 0.2487287125 - - Phytosulfokine receptor precursor, putative [Ricinus communis]
16 Hb_001248_030 0.2503459469 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
17 Hb_001951_090 0.2505778211 transcription factor TF Family: WRKY WRKY transcription factor, putative [Ricinus communis]
18 Hb_001408_050 0.2520549862 - - conserved hypothetical protein [Ricinus communis]
19 Hb_031527_060 0.2550415375 - - glutamate decarboxylase, putative [Ricinus communis]
20 Hb_011970_040 0.255667741 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_070277_010 Hb_070277_010 Hb_003052_200 Hb_003052_200 Hb_070277_010--Hb_003052_200 Hb_004195_110 Hb_004195_110 Hb_070277_010--Hb_004195_110 Hb_000106_070 Hb_000106_070 Hb_070277_010--Hb_000106_070 Hb_050399_010 Hb_050399_010 Hb_070277_010--Hb_050399_010 Hb_000670_110 Hb_000670_110 Hb_070277_010--Hb_000670_110 Hb_002304_140 Hb_002304_140 Hb_070277_010--Hb_002304_140 Hb_003052_200--Hb_000106_070 Hb_003052_200--Hb_000670_110 Hb_001248_030 Hb_001248_030 Hb_003052_200--Hb_001248_030 Hb_011970_040 Hb_011970_040 Hb_003052_200--Hb_011970_040 Hb_003052_200--Hb_002304_140 Hb_004195_110--Hb_000670_110 Hb_004195_110--Hb_001248_030 Hb_004195_110--Hb_002304_140 Hb_004657_040 Hb_004657_040 Hb_004195_110--Hb_004657_040 Hb_007416_150 Hb_007416_150 Hb_004195_110--Hb_007416_150 Hb_000181_160 Hb_000181_160 Hb_004195_110--Hb_000181_160 Hb_000106_070--Hb_000670_110 Hb_011618_040 Hb_011618_040 Hb_000106_070--Hb_011618_040 Hb_003299_010 Hb_003299_010 Hb_000106_070--Hb_003299_010 Hb_000106_070--Hb_011970_040 Hb_003119_070 Hb_003119_070 Hb_000106_070--Hb_003119_070 Hb_050399_010--Hb_003052_200 Hb_050399_010--Hb_000106_070 Hb_050399_010--Hb_011970_040 Hb_050399_010--Hb_000670_110 Hb_001951_030 Hb_001951_030 Hb_050399_010--Hb_001951_030 Hb_000670_110--Hb_011970_040 Hb_000670_110--Hb_011618_040 Hb_000670_110--Hb_001248_030 Hb_002304_140--Hb_001248_030 Hb_002304_140--Hb_007416_150 Hb_009823_010 Hb_009823_010 Hb_002304_140--Hb_009823_010 Hb_000165_210 Hb_000165_210 Hb_002304_140--Hb_000165_210 Hb_000098_310 Hb_000098_310 Hb_002304_140--Hb_000098_310
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.136661 0.720086 0.0289966 0.241843 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0833919 0.131111 0.11668 1.38833 0

CAGE analysis