Hb_063716_070

Information

Type -
Description -
Location Contig63716: 61420-64290
Sequence    

Annotation

kegg
ID pper:PRUPE_ppa020565mg
description hypothetical protein
nr
ID XP_007226302.1
description hypothetical protein PRUPE_ppa020565mg [Prunus persica]
swissprot
ID Q6AVI0
description Zinc finger BED domain-containing protein RICESLEEPER 2 OS=Oryza sativa subsp. japonica GN=Os03g0733400 PE=2 SV=1
trembl
ID M5XPR2
description Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa020565mg PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_063716_070 0.0 - - hypothetical protein PRUPE_ppa020565mg [Prunus persica]
2 Hb_001723_110 0.2940758693 - - PREDICTED: solute carrier family 25 member 44-like isoform X2 [Malus domestica]
3 Hb_003647_120 0.2941971319 - - 18.2 kDa class I heat shock family protein [Populus trichocarpa]
4 Hb_006846_100 0.3104424321 - - hypothetical protein POPTR_0012s11270g [Populus trichocarpa]
5 Hb_161994_020 0.3156428694 - - -
6 Hb_001279_230 0.3161733683 - - PREDICTED: class I heat shock protein-like [Jatropha curcas]
7 Hb_003337_070 0.3189370133 - - PREDICTED: probable esterase KAI2 [Jatropha curcas]
8 Hb_010874_030 0.3256487995 transcription factor TF Family: M-type hypothetical protein JCGZ_10946 [Jatropha curcas]
9 Hb_003992_260 0.3310013529 - - PREDICTED: 26.5 kDa heat shock protein, mitochondrial [Jatropha curcas]
10 Hb_002417_060 0.3326944121 - - Cell division cycle protein, putative [Ricinus communis]
11 Hb_000206_130 0.3332596824 - - unnamed protein product [Vitis vinifera]
12 Hb_011468_010 0.3363546973 - - hypothetical protein B456_008G198600 [Gossypium raimondii]
13 Hb_048207_010 0.3410644948 - - heat-shock protein, putative [Ricinus communis]
14 Hb_184326_010 0.3414947749 - - RecName: Full=Anthocyanidin 3-O-glucosyltransferase 1; AltName: Full=Flavonol 3-O-glucosyltransferase 1; AltName: Full=UDP-glucose flavonoid 3-O-glucosyltransferase 1 [Manihot esculenta]
15 Hb_001104_040 0.3431527636 - - PREDICTED: uncharacterized protein LOC105629509 [Jatropha curcas]
16 Hb_171273_010 0.3434266559 - - E3 ubiquitin-protein ligase UPL5 [Theobroma cacao]
17 Hb_000115_170 0.3478465106 - - hypothetical protein JCGZ_18339 [Jatropha curcas]
18 Hb_053643_010 0.3486113813 - - Zinc finger protein GIS2 [Medicago truncatula]
19 Hb_178613_010 0.3505174532 - - PREDICTED: uncharacterized protein LOC105796032 [Gossypium raimondii]
20 Hb_000796_060 0.352962867 - - Glycogenin-2 [Aegilops tauschii]

Gene co-expression network

sample Hb_063716_070 Hb_063716_070 Hb_001723_110 Hb_001723_110 Hb_063716_070--Hb_001723_110 Hb_003647_120 Hb_003647_120 Hb_063716_070--Hb_003647_120 Hb_006846_100 Hb_006846_100 Hb_063716_070--Hb_006846_100 Hb_161994_020 Hb_161994_020 Hb_063716_070--Hb_161994_020 Hb_001279_230 Hb_001279_230 Hb_063716_070--Hb_001279_230 Hb_003337_070 Hb_003337_070 Hb_063716_070--Hb_003337_070 Hb_001723_110--Hb_003647_120 Hb_003992_260 Hb_003992_260 Hb_001723_110--Hb_003992_260 Hb_001723_110--Hb_001279_230 Hb_004846_180 Hb_004846_180 Hb_001723_110--Hb_004846_180 Hb_027255_010 Hb_027255_010 Hb_001723_110--Hb_027255_010 Hb_000398_130 Hb_000398_130 Hb_001723_110--Hb_000398_130 Hb_003647_120--Hb_001279_230 Hb_184326_010 Hb_184326_010 Hb_003647_120--Hb_184326_010 Hb_003647_120--Hb_003337_070 Hb_006745_020 Hb_006745_020 Hb_003647_120--Hb_006745_020 Hb_003647_120--Hb_000398_130 Hb_006846_100--Hb_003992_260 Hb_009680_030 Hb_009680_030 Hb_006846_100--Hb_009680_030 Hb_043629_020 Hb_043629_020 Hb_006846_100--Hb_043629_020 Hb_006846_090 Hb_006846_090 Hb_006846_100--Hb_006846_090 Hb_002311_250 Hb_002311_250 Hb_006846_100--Hb_002311_250 Hb_000115_170 Hb_000115_170 Hb_006846_100--Hb_000115_170 Hb_004939_020 Hb_004939_020 Hb_161994_020--Hb_004939_020 Hb_001269_560 Hb_001269_560 Hb_161994_020--Hb_001269_560 Hb_002417_060 Hb_002417_060 Hb_161994_020--Hb_002417_060 Hb_134310_030 Hb_134310_030 Hb_161994_020--Hb_134310_030 Hb_161994_020--Hb_003337_070 Hb_001104_040 Hb_001104_040 Hb_001279_230--Hb_001104_040 Hb_001279_230--Hb_003337_070 Hb_001279_230--Hb_184326_010 Hb_001279_230--Hb_006745_020 Hb_003337_070--Hb_006745_020 Hb_000205_070 Hb_000205_070 Hb_003337_070--Hb_000205_070 Hb_009189_030 Hb_009189_030 Hb_003337_070--Hb_009189_030 Hb_003337_070--Hb_184326_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0542177 0 0 0.135547 0.047685
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0324962 0 0.0130213 0

CAGE analysis