Hb_047503_010

Information

Type -
Description -
Location Contig47503: 1554-2126
Sequence    

Annotation

kegg
ID rcu:RCOM_1172110
description hypothetical protein
nr
ID XP_012088206.1
description PREDICTED: putative protein N-methyltransferase YNL024C [Jatropha curcas]
swissprot
ID Q9H867
description Protein-lysine methyltransferase METTL21D OS=Homo sapiens GN=VCPKMT PE=1 SV=2
trembl
ID A0A067JX06
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25731 PE=4 SV=1
Gene Ontology
ID GO:0005634
description protein n-lysine methyltransferase mettl21a-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_047503_010 0.0 - - PREDICTED: putative protein N-methyltransferase YNL024C [Jatropha curcas]
2 Hb_002346_020 0.0573824286 - - -
3 Hb_001512_060 0.0803135407 - - PREDICTED: pentatricopeptide repeat-containing protein At4g35850, mitochondrial [Jatropha curcas]
4 Hb_011609_100 0.0842293587 - - PREDICTED: 30S ribosomal protein 3, chloroplastic-like [Jatropha curcas]
5 Hb_002888_030 0.0844511023 desease resistance Gene Name: NB-ARC PREDICTED: disease resistance protein RPM1 [Jatropha curcas]
6 Hb_002232_440 0.0857987608 - - PREDICTED: uncharacterized protein LOC105130257 [Populus euphratica]
7 Hb_003125_200 0.0867137244 - - PREDICTED: mediator of RNA polymerase II transcription subunit 30 [Jatropha curcas]
8 Hb_001552_020 0.0902333055 - - PREDICTED: uncharacterized protein LOC105639653 [Jatropha curcas]
9 Hb_001305_010 0.0906392095 - - PREDICTED: 1-acyl-sn-glycerol-3-phosphate acyltransferase 1, chloroplastic [Jatropha curcas]
10 Hb_001635_180 0.0927088442 - - PREDICTED: F-box/FBD/LRR-repeat protein At5g53840-like [Jatropha curcas]
11 Hb_012286_030 0.0930974471 transcription factor TF Family: MED7 PREDICTED: mediator of RNA polymerase II transcription subunit 7a [Solanum lycopersicum]
12 Hb_001534_120 0.0938781553 - - PREDICTED: vacuolar protein-sorting-associated protein 37 homolog 1 [Gossypium raimondii]
13 Hb_000362_200 0.0950521851 - - exonuclease family protein [Populus trichocarpa]
14 Hb_001934_030 0.0951618886 transcription factor TF Family: HSF Heat shock factor protein, putative [Ricinus communis]
15 Hb_001269_630 0.0954158507 - - PREDICTED: uncharacterized protein LOC105630301 [Jatropha curcas]
16 Hb_002530_030 0.0962801326 - - PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 4 [Jatropha curcas]
17 Hb_025645_010 0.0967203215 - - PREDICTED: proteasome subunit beta type-5 [Jatropha curcas]
18 Hb_002928_130 0.0969057288 - - PREDICTED: small nuclear ribonucleoprotein Sm D3 [Jatropha curcas]
19 Hb_000175_510 0.097042519 - - PREDICTED: probable DNA replication complex GINS protein PSF1 [Jatropha curcas]
20 Hb_000444_080 0.0971349208 - - hypothetical protein POPTR_0019s10500g [Populus trichocarpa]

Gene co-expression network

sample Hb_047503_010 Hb_047503_010 Hb_002346_020 Hb_002346_020 Hb_047503_010--Hb_002346_020 Hb_001512_060 Hb_001512_060 Hb_047503_010--Hb_001512_060 Hb_011609_100 Hb_011609_100 Hb_047503_010--Hb_011609_100 Hb_002888_030 Hb_002888_030 Hb_047503_010--Hb_002888_030 Hb_002232_440 Hb_002232_440 Hb_047503_010--Hb_002232_440 Hb_003125_200 Hb_003125_200 Hb_047503_010--Hb_003125_200 Hb_002346_020--Hb_001512_060 Hb_001552_020 Hb_001552_020 Hb_002346_020--Hb_001552_020 Hb_002928_130 Hb_002928_130 Hb_002346_020--Hb_002928_130 Hb_000096_070 Hb_000096_070 Hb_002346_020--Hb_000096_070 Hb_002027_250 Hb_002027_250 Hb_002346_020--Hb_002027_250 Hb_010921_010 Hb_010921_010 Hb_001512_060--Hb_010921_010 Hb_000362_200 Hb_000362_200 Hb_001512_060--Hb_000362_200 Hb_001534_120 Hb_001534_120 Hb_001512_060--Hb_001534_120 Hb_007477_070 Hb_007477_070 Hb_001512_060--Hb_007477_070 Hb_007154_020 Hb_007154_020 Hb_001512_060--Hb_007154_020 Hb_003992_240 Hb_003992_240 Hb_011609_100--Hb_003992_240 Hb_005322_040 Hb_005322_040 Hb_011609_100--Hb_005322_040 Hb_011609_100--Hb_003125_200 Hb_000959_210 Hb_000959_210 Hb_011609_100--Hb_000959_210 Hb_011609_100--Hb_002346_020 Hb_002888_030--Hb_002027_250 Hb_017358_030 Hb_017358_030 Hb_002888_030--Hb_017358_030 Hb_002739_100 Hb_002739_100 Hb_002888_030--Hb_002739_100 Hb_002888_030--Hb_002346_020 Hb_005779_060 Hb_005779_060 Hb_002888_030--Hb_005779_060 Hb_002232_440--Hb_002928_130 Hb_002232_440--Hb_007154_020 Hb_001540_010 Hb_001540_010 Hb_002232_440--Hb_001540_010 Hb_001292_020 Hb_001292_020 Hb_002232_440--Hb_001292_020 Hb_002232_440--Hb_010921_010 Hb_000698_030 Hb_000698_030 Hb_002232_440--Hb_000698_030 Hb_000465_460 Hb_000465_460 Hb_003125_200--Hb_000465_460 Hb_001758_100 Hb_001758_100 Hb_003125_200--Hb_001758_100 Hb_004931_070 Hb_004931_070 Hb_003125_200--Hb_004931_070 Hb_012389_020 Hb_012389_020 Hb_003125_200--Hb_012389_020 Hb_027472_040 Hb_027472_040 Hb_003125_200--Hb_027472_040 Hb_029388_020 Hb_029388_020 Hb_003125_200--Hb_029388_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
9.76609 6.07793 7.63431 4.0836 11.7096 5.6558
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
8.22467 15.3077 10.3381 5.35145 4.08291

CAGE analysis