Hb_036790_100

Information

Type -
Description -
Location Contig36790: 78771-79316
Sequence    

Annotation

kegg
ID pop:POPTR_0002s06370g
description POPTRDRAFT_749099; hypothetical protein
nr
ID XP_012086021.1
description PREDICTED: uncharacterized protein LOC105645120 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JQD6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22270 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_036790_100 0.0 - - PREDICTED: uncharacterized protein LOC105645120 [Jatropha curcas]
2 Hb_001595_030 0.0562813123 - - PREDICTED: nuclear inhibitor of protein phosphatase 1 isoform X1 [Jatropha curcas]
3 Hb_000403_050 0.058711007 - - PREDICTED: protein SLOW GREEN 1, chloroplastic [Jatropha curcas]
4 Hb_001242_060 0.0612815145 - - PREDICTED: uncharacterized protein LOC105139508 [Populus euphratica]
5 Hb_002256_030 0.0642841936 - - conserved hypothetical protein [Ricinus communis]
6 Hb_001258_090 0.0660159845 - - PREDICTED: protein spt2-like [Jatropha curcas]
7 Hb_000416_040 0.0679147304 transcription factor TF Family: HSF Heat shock factor protein, putative [Ricinus communis]
8 Hb_096563_010 0.0693540882 - - PREDICTED: cytoplasmic tRNA 2-thiolation protein 1 [Prunus mume]
9 Hb_000757_060 0.0713135197 - - hypothetical protein PRUPE_ppa001141mg [Prunus persica]
10 Hb_007054_060 0.0718528131 - - -
11 Hb_008453_140 0.0721359255 - - PREDICTED: SKP1-like protein 1B [Jatropha curcas]
12 Hb_000038_170 0.0724471421 - - PREDICTED: SCY1-like protein 2 [Jatropha curcas]
13 Hb_000302_270 0.072608726 transcription factor TF Family: MYB-related DNA binding protein, putative [Ricinus communis]
14 Hb_001248_060 0.0726131558 - - conserved hypothetical protein [Ricinus communis]
15 Hb_000563_320 0.0729006253 - - PREDICTED: induced during hyphae development protein 1 [Jatropha curcas]
16 Hb_007075_040 0.0731530201 - - hypothetical protein CISIN_1g039518mg, partial [Citrus sinensis]
17 Hb_007416_180 0.0732336024 - - PREDICTED: exocyst complex component EXO70A1 [Jatropha curcas]
18 Hb_000093_160 0.074165338 - - PREDICTED: nuclear transcription factor Y subunit B-1-like isoform X1 [Jatropha curcas]
19 Hb_002740_030 0.0741817727 transcription factor TF Family: bHLH conserved hypothetical protein [Ricinus communis]
20 Hb_001926_030 0.0745867106 - - PREDICTED: apoptosis inhibitor 5 [Jatropha curcas]

Gene co-expression network

sample Hb_036790_100 Hb_036790_100 Hb_001595_030 Hb_001595_030 Hb_036790_100--Hb_001595_030 Hb_000403_050 Hb_000403_050 Hb_036790_100--Hb_000403_050 Hb_001242_060 Hb_001242_060 Hb_036790_100--Hb_001242_060 Hb_002256_030 Hb_002256_030 Hb_036790_100--Hb_002256_030 Hb_001258_090 Hb_001258_090 Hb_036790_100--Hb_001258_090 Hb_000416_040 Hb_000416_040 Hb_036790_100--Hb_000416_040 Hb_000879_200 Hb_000879_200 Hb_001595_030--Hb_000879_200 Hb_000038_170 Hb_000038_170 Hb_001595_030--Hb_000038_170 Hb_000327_120 Hb_000327_120 Hb_001595_030--Hb_000327_120 Hb_002603_120 Hb_002603_120 Hb_001595_030--Hb_002603_120 Hb_006185_050 Hb_006185_050 Hb_001595_030--Hb_006185_050 Hb_003125_120 Hb_003125_120 Hb_000403_050--Hb_003125_120 Hb_000334_280 Hb_000334_280 Hb_000403_050--Hb_000334_280 Hb_156973_010 Hb_156973_010 Hb_000403_050--Hb_156973_010 Hb_001163_050 Hb_001163_050 Hb_000403_050--Hb_001163_050 Hb_005271_220 Hb_005271_220 Hb_000403_050--Hb_005271_220 Hb_031527_040 Hb_031527_040 Hb_001242_060--Hb_031527_040 Hb_000757_060 Hb_000757_060 Hb_001242_060--Hb_000757_060 Hb_000016_250 Hb_000016_250 Hb_001242_060--Hb_000016_250 Hb_000030_300 Hb_000030_300 Hb_001242_060--Hb_000030_300 Hb_000563_320 Hb_000563_320 Hb_001242_060--Hb_000563_320 Hb_005779_060 Hb_005779_060 Hb_001242_060--Hb_005779_060 Hb_002256_030--Hb_031527_040 Hb_004032_360 Hb_004032_360 Hb_002256_030--Hb_004032_360 Hb_001552_020 Hb_001552_020 Hb_002256_030--Hb_001552_020 Hb_002256_030--Hb_001242_060 Hb_002739_100 Hb_002739_100 Hb_002256_030--Hb_002739_100 Hb_003010_030 Hb_003010_030 Hb_001258_090--Hb_003010_030 Hb_001258_090--Hb_001595_030 Hb_000093_160 Hb_000093_160 Hb_001258_090--Hb_000093_160 Hb_001258_090--Hb_000038_170 Hb_023386_020 Hb_023386_020 Hb_001258_090--Hb_023386_020 Hb_007054_060 Hb_007054_060 Hb_001258_090--Hb_007054_060 Hb_002740_030 Hb_002740_030 Hb_000416_040--Hb_002740_030 Hb_000416_040--Hb_000563_320 Hb_001142_030 Hb_001142_030 Hb_000416_040--Hb_001142_030 Hb_002863_050 Hb_002863_050 Hb_000416_040--Hb_002863_050 Hb_000416_040--Hb_001163_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
13.8595 10.149 7.5781 6.52283 9.61729 12.0353
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
8.97645 13.4654 9.30993 6.27512 5.92876

CAGE analysis