Hb_036291_010

Information

Type -
Description -
Location Contig36291: 279-787
Sequence    

Annotation

kegg
ID rcu:RCOM_0544250
description carbonic anhydrase, putative (EC:4.2.1.1)
nr
ID XP_012065108.1
description PREDICTED: alpha carbonic anhydrase 7-like [Jatropha curcas]
swissprot
ID Q8L817
description Alpha carbonic anhydrase 7 OS=Arabidopsis thaliana GN=ACA7 PE=2 SV=1
trembl
ID A0A067LIF8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05491 PE=4 SV=1
Gene Ontology
ID GO:0004089
description alpha carbonic anhydrase 7-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_37260: 284-712
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_036291_010 0.0 - - PREDICTED: alpha carbonic anhydrase 7-like [Jatropha curcas]
2 Hb_001948_020 0.0304571119 - - -
3 Hb_001546_090 0.0390996809 transcription factor TF Family: MYB PREDICTED: transcription factor MYB114-like [Jatropha curcas]
4 Hb_073973_050 0.0417117835 transcription factor TF Family: GRAS PREDICTED: nodulation-signaling pathway 2 protein [Jatropha curcas]
5 Hb_090894_010 0.0476544203 - - PREDICTED: uncharacterized protein LOC105649214 [Jatropha curcas]
6 Hb_007845_020 0.0539831979 - - PREDICTED: alpha carbonic anhydrase 7-like [Jatropha curcas]
7 Hb_001266_110 0.0559083075 - - conserved hypothetical protein [Ricinus communis]
8 Hb_003334_020 0.0626753972 - - hypothetical protein CISIN_1g041546mg [Citrus sinensis]
9 Hb_033865_020 0.0637096199 - - -
10 Hb_000958_180 0.0660755177 - - hypothetical protein CISIN_1g043061mg, partial [Citrus sinensis]
11 Hb_000315_110 0.0669301551 - - PREDICTED: gibberellin 3-beta-dioxygenase 1-like [Jatropha curcas]
12 Hb_005066_010 0.067115274 - - FAD-binding domain-containing family protein [Populus trichocarpa]
13 Hb_004057_050 0.0711628448 - - PREDICTED: cytochrome P450 76A1-like [Jatropha curcas]
14 Hb_000086_710 0.0720174808 - - PREDICTED: feruloyl CoA ortho-hydroxylase 2-like [Jatropha curcas]
15 Hb_000699_060 0.0766394429 - - hypothetical protein POPTR_0019s03180g [Populus trichocarpa]
16 Hb_000948_040 0.0774762125 - - PREDICTED: germin-like protein subfamily 1 member 13 [Jatropha curcas]
17 Hb_019392_010 0.0789385451 - - PREDICTED: LOW QUALITY PROTEIN: probable S-adenosylmethionine-dependent methyltransferase At5g38100 [Jatropha curcas]
18 Hb_006925_010 0.0836985381 - - PREDICTED: uncharacterized protein LOC101777526 [Setaria italica]
19 Hb_000008_010 0.0853548326 - - PREDICTED: alpha carbonic anhydrase 7-like [Jatropha curcas]
20 Hb_109163_010 0.0897726024 - - polyphenol oxidase [Hevea brasiliensis]

Gene co-expression network

sample Hb_036291_010 Hb_036291_010 Hb_001948_020 Hb_001948_020 Hb_036291_010--Hb_001948_020 Hb_001546_090 Hb_001546_090 Hb_036291_010--Hb_001546_090 Hb_073973_050 Hb_073973_050 Hb_036291_010--Hb_073973_050 Hb_090894_010 Hb_090894_010 Hb_036291_010--Hb_090894_010 Hb_007845_020 Hb_007845_020 Hb_036291_010--Hb_007845_020 Hb_001266_110 Hb_001266_110 Hb_036291_010--Hb_001266_110 Hb_001948_020--Hb_001546_090 Hb_001948_020--Hb_073973_050 Hb_001948_020--Hb_090894_010 Hb_001948_020--Hb_007845_020 Hb_033865_020 Hb_033865_020 Hb_001948_020--Hb_033865_020 Hb_001546_090--Hb_033865_020 Hb_005066_010 Hb_005066_010 Hb_001546_090--Hb_005066_010 Hb_000948_040 Hb_000948_040 Hb_001546_090--Hb_000948_040 Hb_001546_090--Hb_073973_050 Hb_073973_050--Hb_090894_010 Hb_073973_050--Hb_007845_020 Hb_000315_110 Hb_000315_110 Hb_073973_050--Hb_000315_110 Hb_000008_010 Hb_000008_010 Hb_073973_050--Hb_000008_010 Hb_090894_010--Hb_007845_020 Hb_090894_010--Hb_000315_110 Hb_090894_010--Hb_001546_090 Hb_007845_020--Hb_000315_110 Hb_007845_020--Hb_000008_010 Hb_003334_020 Hb_003334_020 Hb_001266_110--Hb_003334_020 Hb_000086_710 Hb_000086_710 Hb_001266_110--Hb_000086_710 Hb_006925_010 Hb_006925_010 Hb_001266_110--Hb_006925_010 Hb_019392_010 Hb_019392_010 Hb_001266_110--Hb_019392_010 Hb_004057_050 Hb_004057_050 Hb_001266_110--Hb_004057_050 Hb_148986_010 Hb_148986_010 Hb_001266_110--Hb_148986_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.244482 4.09807 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 133.162 0

CAGE analysis