Hb_007845_020

Information

Type -
Description -
Location Contig7845: 12313-13410
Sequence    

Annotation

kegg
ID rcu:RCOM_0544250
description carbonic anhydrase, putative (EC:4.2.1.1)
nr
ID XP_012065108.1
description PREDICTED: alpha carbonic anhydrase 7-like [Jatropha curcas]
swissprot
ID Q8L817
description Alpha carbonic anhydrase 7 OS=Arabidopsis thaliana GN=ACA7 PE=2 SV=1
trembl
ID A0A067LIF8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05491 PE=4 SV=1
Gene Ontology
ID GO:0004089
description alpha carbonic anhydrase 7-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007845_020 0.0 - - PREDICTED: alpha carbonic anhydrase 7-like [Jatropha curcas]
2 Hb_073973_050 0.0301946339 transcription factor TF Family: GRAS PREDICTED: nodulation-signaling pathway 2 protein [Jatropha curcas]
3 Hb_090894_010 0.039350332 - - PREDICTED: uncharacterized protein LOC105649214 [Jatropha curcas]
4 Hb_000315_110 0.0400448997 - - PREDICTED: gibberellin 3-beta-dioxygenase 1-like [Jatropha curcas]
5 Hb_001948_020 0.0497634515 - - -
6 Hb_036291_010 0.0539831979 - - PREDICTED: alpha carbonic anhydrase 7-like [Jatropha curcas]
7 Hb_000008_010 0.0561618726 - - PREDICTED: alpha carbonic anhydrase 7-like [Jatropha curcas]
8 Hb_001266_110 0.0642220001 - - conserved hypothetical protein [Ricinus communis]
9 Hb_003334_020 0.0643462011 - - hypothetical protein CISIN_1g041546mg [Citrus sinensis]
10 Hb_001546_090 0.0658455107 transcription factor TF Family: MYB PREDICTED: transcription factor MYB114-like [Jatropha curcas]
11 Hb_004057_050 0.0718757326 - - PREDICTED: cytochrome P450 76A1-like [Jatropha curcas]
12 Hb_001414_080 0.0742540926 - - PREDICTED: probable S-adenosylmethionine-dependent methyltransferase At5g38100 [Jatropha curcas]
13 Hb_001266_090 0.0775653556 - - -
14 Hb_000086_710 0.0796823917 - - PREDICTED: feruloyl CoA ortho-hydroxylase 2-like [Jatropha curcas]
15 Hb_080238_010 0.0838462789 - - Reticuline oxidase precursor, putative [Ricinus communis]
16 Hb_109163_010 0.0850834738 - - polyphenol oxidase [Hevea brasiliensis]
17 Hb_006925_010 0.0900196135 - - PREDICTED: uncharacterized protein LOC101777526 [Setaria italica]
18 Hb_000699_060 0.0912366831 - - hypothetical protein POPTR_0019s03180g [Populus trichocarpa]
19 Hb_019392_010 0.0913740424 - - PREDICTED: LOW QUALITY PROTEIN: probable S-adenosylmethionine-dependent methyltransferase At5g38100 [Jatropha curcas]
20 Hb_033865_020 0.0940079102 - - -

Gene co-expression network

sample Hb_007845_020 Hb_007845_020 Hb_073973_050 Hb_073973_050 Hb_007845_020--Hb_073973_050 Hb_090894_010 Hb_090894_010 Hb_007845_020--Hb_090894_010 Hb_000315_110 Hb_000315_110 Hb_007845_020--Hb_000315_110 Hb_001948_020 Hb_001948_020 Hb_007845_020--Hb_001948_020 Hb_036291_010 Hb_036291_010 Hb_007845_020--Hb_036291_010 Hb_000008_010 Hb_000008_010 Hb_007845_020--Hb_000008_010 Hb_073973_050--Hb_090894_010 Hb_073973_050--Hb_000315_110 Hb_073973_050--Hb_001948_020 Hb_073973_050--Hb_036291_010 Hb_073973_050--Hb_000008_010 Hb_090894_010--Hb_000315_110 Hb_090894_010--Hb_001948_020 Hb_090894_010--Hb_036291_010 Hb_001546_090 Hb_001546_090 Hb_090894_010--Hb_001546_090 Hb_000315_110--Hb_000008_010 Hb_001414_080 Hb_001414_080 Hb_000315_110--Hb_001414_080 Hb_001266_090 Hb_001266_090 Hb_000315_110--Hb_001266_090 Hb_001948_020--Hb_001546_090 Hb_001948_020--Hb_036291_010 Hb_033865_020 Hb_033865_020 Hb_001948_020--Hb_033865_020 Hb_036291_010--Hb_001546_090 Hb_001266_110 Hb_001266_110 Hb_036291_010--Hb_001266_110 Hb_000008_010--Hb_001414_080 Hb_000008_010--Hb_001266_090 Hb_000008_130 Hb_000008_130 Hb_000008_010--Hb_000008_130 Hb_000013_040 Hb_000013_040 Hb_000008_010--Hb_000013_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0.529429 0 0.0530204
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 29.1989 0

CAGE analysis