Hb_000008_010

Information

Type -
Description -
Location Contig8: 5900-6993
Sequence    

Annotation

kegg
ID rcu:RCOM_0544250
description carbonic anhydrase, putative (EC:4.2.1.1)
nr
ID XP_012065108.1
description PREDICTED: alpha carbonic anhydrase 7-like [Jatropha curcas]
swissprot
ID Q8L817
description Alpha carbonic anhydrase 7 OS=Arabidopsis thaliana GN=ACA7 PE=2 SV=1
trembl
ID A0A067LIF8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05491 PE=4 SV=1
Gene Ontology
ID GO:0004089
description alpha carbonic anhydrase 7

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000008_010 0.0 - - PREDICTED: alpha carbonic anhydrase 7-like [Jatropha curcas]
2 Hb_000315_110 0.0213058412 - - PREDICTED: gibberellin 3-beta-dioxygenase 1-like [Jatropha curcas]
3 Hb_001414_080 0.0219918627 - - PREDICTED: probable S-adenosylmethionine-dependent methyltransferase At5g38100 [Jatropha curcas]
4 Hb_001266_090 0.0337770191 - - -
5 Hb_073973_050 0.0520348166 transcription factor TF Family: GRAS PREDICTED: nodulation-signaling pathway 2 protein [Jatropha curcas]
6 Hb_000008_130 0.0545506109 - - PREDICTED: uncharacterized protein LOC105630320 isoform X1 [Jatropha curcas]
7 Hb_000013_040 0.0545506109 - - -
8 Hb_000013_070 0.0545506109 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
9 Hb_000014_180 0.0545506109 - - PREDICTED: endo-1,4-beta-xylanase D-like [Fragaria vesca subsp. vesca]
10 Hb_000021_080 0.0545506109 - - -
11 Hb_000031_270 0.0545506109 transcription factor TF Family: B3 DNA binding protein, putative [Ricinus communis]
12 Hb_000035_070 0.0545506109 - - PREDICTED: uncharacterized protein LOC104814513 [Tarenaya hassleriana]
13 Hb_000041_140 0.0545506109 - - -
14 Hb_000043_130 0.0545506109 - - -
15 Hb_000045_240 0.0545506109 - - -
16 Hb_000056_270 0.0545506109 - - Origin recognition complex subunit, putative [Ricinus communis]
17 Hb_000057_150 0.0545506109 - - hypothetical protein EUTSA_v10009202mg [Eutrema salsugineum]
18 Hb_000059_250 0.0545506109 - - PREDICTED: 40S ribosomal protein S8 [Jatropha curcas]
19 Hb_000062_160 0.0545506109 - - 3'-N-debenzoyl-2'-deoxytaxol N-benzoyltransferase, putative [Ricinus communis]
20 Hb_000068_050 0.0545506109 - - PREDICTED: uncharacterized protein LOC105774125 [Gossypium raimondii]

Gene co-expression network

sample Hb_000008_010 Hb_000008_010 Hb_000315_110 Hb_000315_110 Hb_000008_010--Hb_000315_110 Hb_001414_080 Hb_001414_080 Hb_000008_010--Hb_001414_080 Hb_001266_090 Hb_001266_090 Hb_000008_010--Hb_001266_090 Hb_073973_050 Hb_073973_050 Hb_000008_010--Hb_073973_050 Hb_000008_130 Hb_000008_130 Hb_000008_010--Hb_000008_130 Hb_000013_040 Hb_000013_040 Hb_000008_010--Hb_000013_040 Hb_000315_110--Hb_073973_050 Hb_007845_020 Hb_007845_020 Hb_000315_110--Hb_007845_020 Hb_090894_010 Hb_090894_010 Hb_000315_110--Hb_090894_010 Hb_000315_110--Hb_001414_080 Hb_000315_110--Hb_001266_090 Hb_001414_080--Hb_001266_090 Hb_001414_080--Hb_000008_130 Hb_001414_080--Hb_000013_040 Hb_000013_070 Hb_000013_070 Hb_001414_080--Hb_000013_070 Hb_000014_180 Hb_000014_180 Hb_001414_080--Hb_000014_180 Hb_080238_010 Hb_080238_010 Hb_001266_090--Hb_080238_010 Hb_002929_010 Hb_002929_010 Hb_001266_090--Hb_002929_010 Hb_001266_090--Hb_000008_130 Hb_001266_090--Hb_000013_040 Hb_073973_050--Hb_090894_010 Hb_073973_050--Hb_007845_020 Hb_001948_020 Hb_001948_020 Hb_073973_050--Hb_001948_020 Hb_036291_010 Hb_036291_010 Hb_073973_050--Hb_036291_010 Hb_000008_130--Hb_000013_040 Hb_000008_130--Hb_000013_070 Hb_000008_130--Hb_000014_180 Hb_000021_080 Hb_000021_080 Hb_000008_130--Hb_000021_080 Hb_000031_270 Hb_000031_270 Hb_000008_130--Hb_000031_270 Hb_000035_070 Hb_000035_070 Hb_000008_130--Hb_000035_070 Hb_000008_130--Hb_000013_040 Hb_000008_130--Hb_000013_070 Hb_000008_130--Hb_000014_180 Hb_000008_130--Hb_000021_080 Hb_000008_130--Hb_000031_270 Hb_000008_130--Hb_000035_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0.403569 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 67.5513 0

CAGE analysis