Hb_034506_010

Information

Type -
Description -
Location Contig34506: 7208-12685
Sequence    

Annotation

kegg
ID cic:CICLE_v10009016mg
description hypothetical protein
nr
ID XP_012081137.1
description PREDICTED: protein OS-9 homolog [Jatropha curcas]
swissprot
ID Q8GWH3
description Protein OS-9 homolog OS=Arabidopsis thaliana GN=OS9 PE=1 SV=1
trembl
ID V4UQ02
description Uncharacterized protein OS=Citrus clementina GN=CICLE_v10009016mg PE=4 SV=1
Gene Ontology
ID GO:0006950
description protein os-9 homolog

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_36049: 7237-9475 , PASA_asmbl_36050: 7396-7810
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_034506_010 0.0 - - PREDICTED: protein OS-9 homolog [Jatropha curcas]
2 Hb_011310_210 0.0928527947 - - PREDICTED: serine/threonine-protein kinase PRP4 homolog [Jatropha curcas]
3 Hb_006951_020 0.0930304186 - - Rop3 [Hevea brasiliensis]
4 Hb_000205_300 0.0935540754 - - PREDICTED: uncharacterized protein LOC105647767 [Jatropha curcas]
5 Hb_001135_130 0.0936969523 - - hypothetical protein CISIN_1g0171752mg, partial [Citrus sinensis]
6 Hb_008643_040 0.0971727237 - - PREDICTED: jacalin-related lectin 3-like [Jatropha curcas]
7 Hb_004310_020 0.0985264733 - - PREDICTED: COP9 signalosome complex subunit 7 isoform X1 [Jatropha curcas]
8 Hb_008246_040 0.1024944742 transcription factor TF Family: bZIP PREDICTED: transcription factor RF2a-like [Jatropha curcas]
9 Hb_008749_060 0.1029463018 - - PREDICTED: uncharacterized protein LOC105639821 [Jatropha curcas]
10 Hb_000645_120 0.1032778699 - - PREDICTED: ubiquitin-conjugating enzyme E2 32 [Jatropha curcas]
11 Hb_001047_030 0.1057545481 - - PREDICTED: protein transport protein SEC13 homolog B [Jatropha curcas]
12 Hb_000365_390 0.1072904614 - - PREDICTED: KH domain-containing protein At2g38610 [Jatropha curcas]
13 Hb_032920_060 0.1078514863 - - PREDICTED: mitotic checkpoint protein BUB3.1 [Jatropha curcas]
14 Hb_010457_030 0.1088430198 - - APO protein 4, mitochondrial precursor, putative [Ricinus communis]
15 Hb_008120_030 0.1091233364 - - PREDICTED: uncharacterized protein LOC101216675 [Cucumis sativus]
16 Hb_003528_010 0.1095564688 transcription factor TF Family: MYB PREDICTED: myb-related protein 3R-1 [Jatropha curcas]
17 Hb_000755_030 0.1100165602 - - PREDICTED: uncharacterized protein LOC105640834 [Jatropha curcas]
18 Hb_002067_120 0.1104625906 - - PREDICTED: uncharacterized protein LOC105111554 isoform X1 [Populus euphratica]
19 Hb_002671_140 0.1137741046 - - calcium-dependent protein kinase [Hevea brasiliensis]
20 Hb_000125_130 0.1140329913 transcription factor TF Family: mTERF PREDICTED: uncharacterized protein LOC104879785 [Vitis vinifera]

Gene co-expression network

sample Hb_034506_010 Hb_034506_010 Hb_011310_210 Hb_011310_210 Hb_034506_010--Hb_011310_210 Hb_006951_020 Hb_006951_020 Hb_034506_010--Hb_006951_020 Hb_000205_300 Hb_000205_300 Hb_034506_010--Hb_000205_300 Hb_001135_130 Hb_001135_130 Hb_034506_010--Hb_001135_130 Hb_008643_040 Hb_008643_040 Hb_034506_010--Hb_008643_040 Hb_004310_020 Hb_004310_020 Hb_034506_010--Hb_004310_020 Hb_008120_030 Hb_008120_030 Hb_011310_210--Hb_008120_030 Hb_000777_050 Hb_000777_050 Hb_011310_210--Hb_000777_050 Hb_003549_090 Hb_003549_090 Hb_011310_210--Hb_003549_090 Hb_002942_050 Hb_002942_050 Hb_011310_210--Hb_002942_050 Hb_011310_130 Hb_011310_130 Hb_011310_210--Hb_011310_130 Hb_000309_040 Hb_000309_040 Hb_011310_210--Hb_000309_040 Hb_000322_100 Hb_000322_100 Hb_006951_020--Hb_000322_100 Hb_000755_030 Hb_000755_030 Hb_006951_020--Hb_000755_030 Hb_001047_030 Hb_001047_030 Hb_006951_020--Hb_001047_030 Hb_002067_120 Hb_002067_120 Hb_006951_020--Hb_002067_120 Hb_007477_080 Hb_007477_080 Hb_006951_020--Hb_007477_080 Hb_003502_080 Hb_003502_080 Hb_006951_020--Hb_003502_080 Hb_000603_150 Hb_000603_150 Hb_000205_300--Hb_000603_150 Hb_000205_300--Hb_004310_020 Hb_158062_010 Hb_158062_010 Hb_000205_300--Hb_158062_010 Hb_000120_670 Hb_000120_670 Hb_000205_300--Hb_000120_670 Hb_003693_070 Hb_003693_070 Hb_000205_300--Hb_003693_070 Hb_010712_030 Hb_010712_030 Hb_000205_300--Hb_010712_030 Hb_001135_130--Hb_004310_020 Hb_000982_060 Hb_000982_060 Hb_001135_130--Hb_000982_060 Hb_000442_150 Hb_000442_150 Hb_001135_130--Hb_000442_150 Hb_001135_130--Hb_000205_300 Hb_002235_210 Hb_002235_210 Hb_001135_130--Hb_002235_210 Hb_057878_010 Hb_057878_010 Hb_001135_130--Hb_057878_010 Hb_000125_130 Hb_000125_130 Hb_008643_040--Hb_000125_130 Hb_000045_090 Hb_000045_090 Hb_008643_040--Hb_000045_090 Hb_000365_390 Hb_000365_390 Hb_008643_040--Hb_000365_390 Hb_004767_100 Hb_004767_100 Hb_008643_040--Hb_004767_100 Hb_007416_280 Hb_007416_280 Hb_008643_040--Hb_007416_280 Hb_008643_040--Hb_000205_300 Hb_004310_020--Hb_010712_030 Hb_004310_020--Hb_158062_010 Hb_001051_080 Hb_001051_080 Hb_004310_020--Hb_001051_080 Hb_003549_150 Hb_003549_150 Hb_004310_020--Hb_003549_150
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.95134 1.1414 0.9678 1.45381 1.04914 2.35007
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.87825 1.0198 1.28344 0.975647 0.339919

CAGE analysis