Hb_008643_040

Information

Type -
Description -
Location Contig8643: 43689-50174
Sequence    

Annotation

kegg
ID egr:104451657
description jacalin-related lectin 4-like
nr
ID XP_012079648.1
description PREDICTED: jacalin-related lectin 3-like [Jatropha curcas]
swissprot
ID Q9LQ31
description Jacalin-related lectin 4 OS=Arabidopsis thaliana GN=JAL4 PE=2 SV=1
trembl
ID A0A067KHF9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15015 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_60887: 43045-48530 , PASA_asmbl_60888: 48619-49997 , PASA_asmbl_60889: 50132-79383
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_008643_040 0.0 - - PREDICTED: jacalin-related lectin 3-like [Jatropha curcas]
2 Hb_000125_130 0.0630281926 transcription factor TF Family: mTERF PREDICTED: uncharacterized protein LOC104879785 [Vitis vinifera]
3 Hb_000045_090 0.0909676743 - - PREDICTED: syntaxin-31 [Jatropha curcas]
4 Hb_000365_390 0.0909721026 - - PREDICTED: KH domain-containing protein At2g38610 [Jatropha curcas]
5 Hb_004767_100 0.0913706834 - - eukaryotic translation initiation factor 2c, putative [Ricinus communis]
6 Hb_007416_280 0.0944772505 - - conserved hypothetical protein [Ricinus communis]
7 Hb_000205_300 0.0945662449 - - PREDICTED: uncharacterized protein LOC105647767 [Jatropha curcas]
8 Hb_001287_080 0.0947993594 - - conserved hypothetical protein [Ricinus communis]
9 Hb_000953_020 0.0952025281 - - PREDICTED: serine/threonine-protein kinase CTR1 [Jatropha curcas]
10 Hb_006951_020 0.095440263 - - Rop3 [Hevea brasiliensis]
11 Hb_004310_020 0.0966987253 - - PREDICTED: COP9 signalosome complex subunit 7 isoform X1 [Jatropha curcas]
12 Hb_034506_010 0.0971727237 - - PREDICTED: protein OS-9 homolog [Jatropha curcas]
13 Hb_143398_010 0.0975544201 - - PREDICTED: peter Pan-like protein [Jatropha curcas]
14 Hb_004032_150 0.0988142104 - - PREDICTED: chaperone protein dnaJ 10-like [Jatropha curcas]
15 Hb_010712_030 0.0997613392 - - conserved hypothetical protein [Ricinus communis]
16 Hb_003498_090 0.0999740799 - - hypothetical protein RCOM_0867850 [Ricinus communis]
17 Hb_001638_170 0.1006527201 - - hypothetical protein Csa_3G118170 [Cucumis sativus]
18 Hb_002067_120 0.1007173058 - - PREDICTED: uncharacterized protein LOC105111554 isoform X1 [Populus euphratica]
19 Hb_007904_200 0.1018745379 - - protein binding protein, putative [Ricinus communis]
20 Hb_010457_030 0.1022181902 - - APO protein 4, mitochondrial precursor, putative [Ricinus communis]

Gene co-expression network

sample Hb_008643_040 Hb_008643_040 Hb_000125_130 Hb_000125_130 Hb_008643_040--Hb_000125_130 Hb_000045_090 Hb_000045_090 Hb_008643_040--Hb_000045_090 Hb_000365_390 Hb_000365_390 Hb_008643_040--Hb_000365_390 Hb_004767_100 Hb_004767_100 Hb_008643_040--Hb_004767_100 Hb_007416_280 Hb_007416_280 Hb_008643_040--Hb_007416_280 Hb_000205_300 Hb_000205_300 Hb_008643_040--Hb_000205_300 Hb_007904_200 Hb_007904_200 Hb_000125_130--Hb_007904_200 Hb_010712_030 Hb_010712_030 Hb_000125_130--Hb_010712_030 Hb_000125_130--Hb_000365_390 Hb_010457_030 Hb_010457_030 Hb_000125_130--Hb_010457_030 Hb_002835_080 Hb_002835_080 Hb_000125_130--Hb_002835_080 Hb_002774_060 Hb_002774_060 Hb_000045_090--Hb_002774_060 Hb_009557_070 Hb_009557_070 Hb_000045_090--Hb_009557_070 Hb_000329_030 Hb_000329_030 Hb_000045_090--Hb_000329_030 Hb_004545_060 Hb_004545_060 Hb_000045_090--Hb_004545_060 Hb_143398_010 Hb_143398_010 Hb_000045_090--Hb_143398_010 Hb_005686_060 Hb_005686_060 Hb_000045_090--Hb_005686_060 Hb_000365_390--Hb_010457_030 Hb_000010_330 Hb_000010_330 Hb_000365_390--Hb_000010_330 Hb_000365_390--Hb_007904_200 Hb_001638_170 Hb_001638_170 Hb_000365_390--Hb_001638_170 Hb_148644_010 Hb_148644_010 Hb_000365_390--Hb_148644_010 Hb_004032_150 Hb_004032_150 Hb_004767_100--Hb_004032_150 Hb_000608_240 Hb_000608_240 Hb_004767_100--Hb_000608_240 Hb_000318_290 Hb_000318_290 Hb_004767_100--Hb_000318_290 Hb_005170_040 Hb_005170_040 Hb_004767_100--Hb_005170_040 Hb_004767_100--Hb_148644_010 Hb_004767_100--Hb_000205_300 Hb_003092_040 Hb_003092_040 Hb_007416_280--Hb_003092_040 Hb_007416_280--Hb_004032_150 Hb_002026_180 Hb_002026_180 Hb_007416_280--Hb_002026_180 Hb_001489_150 Hb_001489_150 Hb_007416_280--Hb_001489_150 Hb_019280_040 Hb_019280_040 Hb_007416_280--Hb_019280_040 Hb_000618_040 Hb_000618_040 Hb_007416_280--Hb_000618_040 Hb_000603_150 Hb_000603_150 Hb_000205_300--Hb_000603_150 Hb_004310_020 Hb_004310_020 Hb_000205_300--Hb_004310_020 Hb_158062_010 Hb_158062_010 Hb_000205_300--Hb_158062_010 Hb_000120_670 Hb_000120_670 Hb_000205_300--Hb_000120_670 Hb_003693_070 Hb_003693_070 Hb_000205_300--Hb_003693_070 Hb_000205_300--Hb_010712_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
10.4559 9.0255 6.72784 11.3583 7.27718 20.5068
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
10.0411 11.2963 10.1305 5.68363 3.75221

CAGE analysis