Hb_032803_010

Information

Type -
Description -
Location Contig32803: 6569-13683
Sequence    

Annotation

kegg
ID pop:POPTR_0016s04140g
description POPTRDRAFT_734840; GCN5-related N-acetyltransferase family protein
nr
ID XP_012085951.1
description PREDICTED: glycosyltransferase-like At2g41451 [Jatropha curcas]
swissprot
ID Q5XV99
description Glycosyltransferase-like At3g57200 OS=Arabidopsis thaliana GN=At3g57200 PE=2 SV=1
trembl
ID A0A067JTV9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22449 PE=4 SV=1
Gene Ontology
ID GO:0016740
description glycosyltransferase-like at2g41451

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_34450: 6649-13369
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_032803_010 0.0 - - PREDICTED: glycosyltransferase-like At2g41451 [Jatropha curcas]
2 Hb_027073_050 0.0959244387 - - PREDICTED: uncharacterized protein LOC105635813 isoform X2 [Jatropha curcas]
3 Hb_000963_180 0.0965722493 - - calcium/calmodulin-dependent protein kinase kinase, putative [Ricinus communis]
4 Hb_000069_550 0.0978798629 - - PREDICTED: uncharacterized protein LOC104596457 isoform X1 [Nelumbo nucifera]
5 Hb_000431_010 0.1003502565 - - hypothetical protein POPTR_0016s05340g [Populus trichocarpa]
6 Hb_006569_100 0.1018573516 - - hypothetical protein POPTR_0005s26990g [Populus trichocarpa]
7 Hb_007594_120 0.1037468466 transcription factor TF Family: MIKC MADS-box transcription factor 2 [Hevea brasiliensis]
8 Hb_000302_220 0.1039294516 - - PREDICTED: origin of replication complex subunit 5 isoform X1 [Jatropha curcas]
9 Hb_000975_300 0.1042885535 - - Rab2 [Hevea brasiliensis]
10 Hb_004126_070 0.1056479043 desease resistance Gene Name: CDC48_2 PREDICTED: vesicle-fusing ATPase [Jatropha curcas]
11 Hb_001454_120 0.1072531925 - - conserved hypothetical protein [Ricinus communis]
12 Hb_002182_030 0.1079812974 - - hypothetical protein Csa_5G139175 [Cucumis sativus]
13 Hb_001461_010 0.1096156954 - - PREDICTED: trafficking protein particle complex subunit 5 [Pyrus x bretschneideri]
14 Hb_000240_090 0.1096601257 - - Rab5 [Hevea brasiliensis]
15 Hb_001191_090 0.1097008649 - - PREDICTED: uncharacterized protein LOC105643880 [Jatropha curcas]
16 Hb_012505_010 0.1098366585 - - mak, putative [Ricinus communis]
17 Hb_000173_220 0.1102599303 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein At5g19025 [Jatropha curcas]
18 Hb_008300_010 0.1104777856 - - PREDICTED: UDP-N-acetylglucosamine transferase subunit ALG13 homolog [Jatropha curcas]
19 Hb_000272_070 0.1105071227 - - snare protein YKt [Hevea brasiliensis]
20 Hb_000120_680 0.1116211872 - - PREDICTED: uncharacterized protein LOC105628572 [Jatropha curcas]

Gene co-expression network

sample Hb_032803_010 Hb_032803_010 Hb_027073_050 Hb_027073_050 Hb_032803_010--Hb_027073_050 Hb_000963_180 Hb_000963_180 Hb_032803_010--Hb_000963_180 Hb_000069_550 Hb_000069_550 Hb_032803_010--Hb_000069_550 Hb_000431_010 Hb_000431_010 Hb_032803_010--Hb_000431_010 Hb_006569_100 Hb_006569_100 Hb_032803_010--Hb_006569_100 Hb_007594_120 Hb_007594_120 Hb_032803_010--Hb_007594_120 Hb_001461_010 Hb_001461_010 Hb_027073_050--Hb_001461_010 Hb_027073_050--Hb_006569_100 Hb_002918_290 Hb_002918_290 Hb_027073_050--Hb_002918_290 Hb_001904_090 Hb_001904_090 Hb_027073_050--Hb_001904_090 Hb_001191_090 Hb_001191_090 Hb_027073_050--Hb_001191_090 Hb_017413_010 Hb_017413_010 Hb_027073_050--Hb_017413_010 Hb_000023_340 Hb_000023_340 Hb_000963_180--Hb_000023_340 Hb_029866_070 Hb_029866_070 Hb_000963_180--Hb_029866_070 Hb_000046_110 Hb_000046_110 Hb_000963_180--Hb_000046_110 Hb_000963_180--Hb_001461_010 Hb_001829_060 Hb_001829_060 Hb_000963_180--Hb_001829_060 Hb_029866_040 Hb_029866_040 Hb_000963_180--Hb_029866_040 Hb_000069_550--Hb_006569_100 Hb_000069_550--Hb_007594_120 Hb_002603_150 Hb_002603_150 Hb_000069_550--Hb_002603_150 Hb_002876_120 Hb_002876_120 Hb_000069_550--Hb_002876_120 Hb_017948_010 Hb_017948_010 Hb_000069_550--Hb_017948_010 Hb_000069_550--Hb_001191_090 Hb_002687_110 Hb_002687_110 Hb_000431_010--Hb_002687_110 Hb_031862_110 Hb_031862_110 Hb_000431_010--Hb_031862_110 Hb_009486_130 Hb_009486_130 Hb_000431_010--Hb_009486_130 Hb_008300_010 Hb_008300_010 Hb_000431_010--Hb_008300_010 Hb_001277_330 Hb_001277_330 Hb_000431_010--Hb_001277_330 Hb_001140_060 Hb_001140_060 Hb_000431_010--Hb_001140_060 Hb_001314_040 Hb_001314_040 Hb_006569_100--Hb_001314_040 Hb_020419_020 Hb_020419_020 Hb_006569_100--Hb_020419_020 Hb_068056_030 Hb_068056_030 Hb_006569_100--Hb_068056_030 Hb_001519_030 Hb_001519_030 Hb_006569_100--Hb_001519_030 Hb_001008_090 Hb_001008_090 Hb_006569_100--Hb_001008_090 Hb_007594_120--Hb_002876_120 Hb_000975_300 Hb_000975_300 Hb_007594_120--Hb_000975_300 Hb_000062_340 Hb_000062_340 Hb_007594_120--Hb_000062_340 Hb_020301_040 Hb_020301_040 Hb_007594_120--Hb_020301_040 Hb_024714_060 Hb_024714_060 Hb_007594_120--Hb_024714_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
19.0082 5.55605 10.9857 23.6632 27.999 19.006
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
41.0436 62.0034 65.8841 12.1623 12.3666

CAGE analysis