Hb_020259_020

Information

Type -
Description -
Location Contig20259: 13898-19003
Sequence    

Annotation

kegg
ID rcu:RCOM_0502210
description phosphatidylinositol-4-phosphate 5-kinase, putative (EC:2.7.1.68)
nr
ID XP_012082577.1
description PREDICTED: phosphatidylinositol 4-phosphate 5-kinase 4 [Jatropha curcas]
swissprot
ID Q9M1K2
description Phosphatidylinositol 4-phosphate 5-kinase 4 OS=Arabidopsis thaliana GN=PIP5K4 PE=3 SV=1
trembl
ID A0A067JZI3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16656 PE=4 SV=1
Gene Ontology
ID GO:0005829
description phosphatidylinositol 4-phosphate 5-kinase 5-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_20611: 18668-18892
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_020259_020 0.0 - - PREDICTED: phosphatidylinositol 4-phosphate 5-kinase 4 [Jatropha curcas]
2 Hb_000170_170 0.0936416584 - - PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase 5 [Jatropha curcas]
3 Hb_005870_010 0.2350964582 - - -
4 Hb_002309_030 0.2355871189 - - Glycerol dehydrogenase large subunit, putative [Theobroma cacao]
5 Hb_010866_020 0.2534884544 - - unnamed protein product [Vitis vinifera]
6 Hb_004308_010 0.2595704524 - - hypothetical protein CISIN_1g0004672mg, partial [Citrus sinensis]
7 Hb_000181_370 0.2597823704 - - conserved hypothetical protein [Ricinus communis]
8 Hb_006469_110 0.271693688 - - hypothetical protein JCGZ_12008 [Jatropha curcas]
9 Hb_004308_020 0.2883875031 - - hypothetical protein POPTR_0005s15590g [Populus trichocarpa]
10 Hb_008971_020 0.2904208273 - - PREDICTED: UPF0481 protein At3g47200-like [Eucalyptus grandis]
11 Hb_000069_290 0.2966963078 - - hypothetical protein POPTR_0014s09500g [Populus trichocarpa]
12 Hb_054581_010 0.2970031931 - - Type I inositol-1,4,5-trisphosphate 5-phosphatase CVP2 [Theobroma cacao]
13 Hb_000291_170 0.2988982983 - - PREDICTED: inactive rhomboid protein 1 isoform X1 [Jatropha curcas]
14 Hb_000753_270 0.3029334865 - - -
15 Hb_002320_050 0.3043204197 - - clathrin assembly family protein [Populus trichocarpa]
16 Hb_001810_040 0.3115997175 - - -
17 Hb_000347_520 0.3147905148 transcription factor TF Family: AP2 hypothetical protein JCGZ_24704 [Jatropha curcas]
18 Hb_001369_500 0.3167501908 - - endo-1,4-beta-glucanase, putative [Ricinus communis]
19 Hb_003906_020 0.3197974081 - - PREDICTED: uncharacterized protein LOC105648535 [Jatropha curcas]
20 Hb_149985_020 0.3200550708 - - PREDICTED: zeatin O-glucosyltransferase-like [Nicotiana tomentosiformis]

Gene co-expression network

sample Hb_020259_020 Hb_020259_020 Hb_000170_170 Hb_000170_170 Hb_020259_020--Hb_000170_170 Hb_005870_010 Hb_005870_010 Hb_020259_020--Hb_005870_010 Hb_002309_030 Hb_002309_030 Hb_020259_020--Hb_002309_030 Hb_010866_020 Hb_010866_020 Hb_020259_020--Hb_010866_020 Hb_004308_010 Hb_004308_010 Hb_020259_020--Hb_004308_010 Hb_000181_370 Hb_000181_370 Hb_020259_020--Hb_000181_370 Hb_000170_170--Hb_010866_020 Hb_000170_170--Hb_005870_010 Hb_006469_110 Hb_006469_110 Hb_000170_170--Hb_006469_110 Hb_000170_170--Hb_002309_030 Hb_000170_170--Hb_004308_010 Hb_005870_010--Hb_010866_020 Hb_087388_010 Hb_087388_010 Hb_005870_010--Hb_087388_010 Hb_005870_010--Hb_004308_010 Hb_000347_520 Hb_000347_520 Hb_005870_010--Hb_000347_520 Hb_002309_030--Hb_006469_110 Hb_003333_070 Hb_003333_070 Hb_002309_030--Hb_003333_070 Hb_002309_030--Hb_004308_010 Hb_008535_020 Hb_008535_020 Hb_002309_030--Hb_008535_020 Hb_000188_080 Hb_000188_080 Hb_002309_030--Hb_000188_080 Hb_002186_120 Hb_002186_120 Hb_002309_030--Hb_002186_120 Hb_010866_020--Hb_000347_520 Hb_010866_020--Hb_004308_010 Hb_010866_020--Hb_006469_110 Hb_010866_020--Hb_087388_010 Hb_004308_010--Hb_003333_070 Hb_000577_060 Hb_000577_060 Hb_004308_010--Hb_000577_060 Hb_000753_270 Hb_000753_270 Hb_004308_010--Hb_000753_270 Hb_004308_010--Hb_000188_080 Hb_001405_240 Hb_001405_240 Hb_000181_370--Hb_001405_240 Hb_000984_040 Hb_000984_040 Hb_000181_370--Hb_000984_040 Hb_000032_160 Hb_000032_160 Hb_000181_370--Hb_000032_160 Hb_177587_010 Hb_177587_010 Hb_000181_370--Hb_177587_010 Hb_027136_020 Hb_027136_020 Hb_000181_370--Hb_027136_020 Hb_000334_040 Hb_000334_040 Hb_000181_370--Hb_000334_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.00882878 0.00660592 0.0581354 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.020234 0 0 0 0

CAGE analysis