Hb_008206_070

Information

Type -
Description -
Location Contig8206: 66516-67419
Sequence    

Annotation

kegg
ID -
description -
nr
ID KDP44995.1
description hypothetical protein JCGZ_01495 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067LJY5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01495 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_008206_070 0.0 - - hypothetical protein JCGZ_01495 [Jatropha curcas]
2 Hb_000059_120 0.1471882501 - - JHL22C18.10 [Jatropha curcas]
3 Hb_027380_240 0.2548457754 - - PREDICTED: phospholipase A1-Igamma1, chloroplastic [Jatropha curcas]
4 Hb_007040_010 0.2678630584 - - Uncharacterized protein TCM_024356 [Theobroma cacao]
5 Hb_001390_080 0.2939955722 - - structural constituent of cell wall, putative [Ricinus communis]
6 Hb_000628_010 0.2947760332 - - PREDICTED: uncharacterized protein LOC105795966 [Gossypium raimondii]
7 Hb_008643_050 0.2948785591 - - PREDICTED: uncharacterized protein LOC105160092 [Sesamum indicum]
8 Hb_000752_080 0.2981292569 - - -
9 Hb_000733_250 0.3025745885 - - serine/threonine protein phosphatase PP1 isozyme 1 [Loa loa]
10 Hb_000608_330 0.3030624692 - - Zeamatin precursor, putative [Ricinus communis]
11 Hb_162094_010 0.3040826584 - - RNA polymerase alpha subunit [Hevea brasiliensis]
12 Hb_002320_030 0.3090191769 - - leucine-rich repeat-containing protein, putative [Ricinus communis]
13 Hb_016529_010 0.3102516078 - - polyprotein [Oryza australiensis]
14 Hb_003228_090 0.3139872609 transcription factor TF Family: C2H2 PREDICTED: uncharacterized protein LOC105637258 [Jatropha curcas]
15 Hb_000627_010 0.3172422784 - - PREDICTED: uncharacterized protein LOC105634770 [Jatropha curcas]
16 Hb_008758_010 0.3191673849 - - hypothetical protein PRUPE_ppa022673mg [Prunus persica]
17 Hb_000115_040 0.3212812431 - - conserved hypothetical protein [Ricinus communis]
18 Hb_023675_030 0.3340872703 - - -
19 Hb_004880_090 0.3440480907 - - hypothetical protein POPTR_0011s01952g [Populus trichocarpa]
20 Hb_007810_070 0.3451310241 - - hypothetical protein VITISV_027174 [Vitis vinifera]

Gene co-expression network

sample Hb_008206_070 Hb_008206_070 Hb_000059_120 Hb_000059_120 Hb_008206_070--Hb_000059_120 Hb_027380_240 Hb_027380_240 Hb_008206_070--Hb_027380_240 Hb_007040_010 Hb_007040_010 Hb_008206_070--Hb_007040_010 Hb_001390_080 Hb_001390_080 Hb_008206_070--Hb_001390_080 Hb_000628_010 Hb_000628_010 Hb_008206_070--Hb_000628_010 Hb_008643_050 Hb_008643_050 Hb_008206_070--Hb_008643_050 Hb_153636_010 Hb_153636_010 Hb_000059_120--Hb_153636_010 Hb_000059_120--Hb_007040_010 Hb_003228_090 Hb_003228_090 Hb_000059_120--Hb_003228_090 Hb_000059_120--Hb_008643_050 Hb_000059_120--Hb_001390_080 Hb_004143_030 Hb_004143_030 Hb_027380_240--Hb_004143_030 Hb_162094_010 Hb_162094_010 Hb_027380_240--Hb_162094_010 Hb_001338_160 Hb_001338_160 Hb_027380_240--Hb_001338_160 Hb_001155_020 Hb_001155_020 Hb_027380_240--Hb_001155_020 Hb_000049_220 Hb_000049_220 Hb_027380_240--Hb_000049_220 Hb_000752_080 Hb_000752_080 Hb_007040_010--Hb_000752_080 Hb_008758_010 Hb_008758_010 Hb_007040_010--Hb_008758_010 Hb_004010_020 Hb_004010_020 Hb_007040_010--Hb_004010_020 Hb_012184_030 Hb_012184_030 Hb_007040_010--Hb_012184_030 Hb_001390_080--Hb_000628_010 Hb_001390_080--Hb_008643_050 Hb_000608_330 Hb_000608_330 Hb_001390_080--Hb_000608_330 Hb_000627_010 Hb_000627_010 Hb_001390_080--Hb_000627_010 Hb_000115_040 Hb_000115_040 Hb_001390_080--Hb_000115_040 Hb_001390_080--Hb_003228_090 Hb_000628_010--Hb_008643_050 Hb_000628_010--Hb_000627_010 Hb_000628_010--Hb_000608_330 Hb_000628_010--Hb_000115_040 Hb_000628_010--Hb_003228_090 Hb_008643_050--Hb_000627_010 Hb_008643_050--Hb_000608_330 Hb_008643_050--Hb_000115_040 Hb_008643_050--Hb_003228_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.107039 0 0.0857025 0 0.101197 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0.336323

CAGE analysis