Hb_008096_030

Information

Type -
Description -
Location Contig8096: 10143-13389
Sequence    

Annotation

kegg
ID egr:104414411
description uncharacterized LOC104414411
nr
ID XP_012077633.1
description PREDICTED: uncharacterized protein LOC105638438 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KM37
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12889 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_59192: 6902-10463
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_008096_030 0.0 - - PREDICTED: uncharacterized protein LOC105638438 [Jatropha curcas]
2 Hb_168973_010 0.0798983935 - - -
3 Hb_002445_120 0.1169534831 - - secretory carrier membrane protein, putative [Ricinus communis]
4 Hb_021238_050 0.1176141633 - - conserved hypothetical protein [Ricinus communis]
5 Hb_066768_010 0.1176229302 - - PREDICTED: outer envelope pore protein 16-3, chloroplastic/mitochondrial [Jatropha curcas]
6 Hb_001250_060 0.1238442923 - - PREDICTED: signal recognition particle receptor subunit beta-like [Jatropha curcas]
7 Hb_007763_060 0.1273439045 - - BnaA02g23510D [Brassica napus]
8 Hb_004072_020 0.1273643952 - - PREDICTED: uncharacterized protein LOC105635274 [Jatropha curcas]
9 Hb_000162_260 0.1285553247 - - PREDICTED: peptidyl-prolyl cis-trans isomerase CYP21-1 [Nelumbo nucifera]
10 Hb_115107_010 0.1300161988 - - Early-responsive to dehydration stress protein (ERD4) isoform 1 [Theobroma cacao]
11 Hb_000705_120 0.130067009 - - glycosyltransferase, putative [Ricinus communis]
12 Hb_005023_030 0.1301084732 - - PREDICTED: uncharacterized protein LOC103417254 [Malus domestica]
13 Hb_006198_080 0.130126829 - - hypothetical protein MIMGU_mgv1a013452mg [Erythranthe guttata]
14 Hb_000083_170 0.1318041525 - - PREDICTED: DNA-directed RNA polymerase V subunit 7-like [Populus euphratica]
15 Hb_037887_010 0.1318585394 - - Charged multivesicular body protein 2a, putative [Ricinus communis]
16 Hb_024714_100 0.1321646679 - - PREDICTED: alkylated DNA repair protein alkB homolog 8 isoform X1 [Jatropha curcas]
17 Hb_001935_130 0.133664661 - - PREDICTED: uncharacterized protein LOC105643176 [Jatropha curcas]
18 Hb_003777_310 0.1341414127 - - conserved hypothetical protein [Ricinus communis]
19 Hb_000735_110 0.1350172671 - - fk506-binding protein, putative [Ricinus communis]
20 Hb_020665_040 0.1364097812 transcription factor TF Family: Jumonji PREDICTED: trichohyalin-like [Malus domestica]

Gene co-expression network

sample Hb_008096_030 Hb_008096_030 Hb_168973_010 Hb_168973_010 Hb_008096_030--Hb_168973_010 Hb_002445_120 Hb_002445_120 Hb_008096_030--Hb_002445_120 Hb_021238_050 Hb_021238_050 Hb_008096_030--Hb_021238_050 Hb_066768_010 Hb_066768_010 Hb_008096_030--Hb_066768_010 Hb_001250_060 Hb_001250_060 Hb_008096_030--Hb_001250_060 Hb_007763_060 Hb_007763_060 Hb_008096_030--Hb_007763_060 Hb_115477_010 Hb_115477_010 Hb_168973_010--Hb_115477_010 Hb_115107_010 Hb_115107_010 Hb_168973_010--Hb_115107_010 Hb_005023_030 Hb_005023_030 Hb_168973_010--Hb_005023_030 Hb_168973_010--Hb_007763_060 Hb_000074_060 Hb_000074_060 Hb_168973_010--Hb_000074_060 Hb_003777_310 Hb_003777_310 Hb_002445_120--Hb_003777_310 Hb_000318_290 Hb_000318_290 Hb_002445_120--Hb_000318_290 Hb_000056_260 Hb_000056_260 Hb_002445_120--Hb_000056_260 Hb_001633_130 Hb_001633_130 Hb_002445_120--Hb_001633_130 Hb_044736_010 Hb_044736_010 Hb_002445_120--Hb_044736_010 Hb_000107_200 Hb_000107_200 Hb_002445_120--Hb_000107_200 Hb_003092_030 Hb_003092_030 Hb_021238_050--Hb_003092_030 Hb_006198_080 Hb_006198_080 Hb_021238_050--Hb_006198_080 Hb_037887_010 Hb_037887_010 Hb_021238_050--Hb_037887_010 Hb_021238_050--Hb_000056_260 Hb_000326_090 Hb_000326_090 Hb_021238_050--Hb_000326_090 Hb_002296_040 Hb_002296_040 Hb_021238_050--Hb_002296_040 Hb_004784_020 Hb_004784_020 Hb_066768_010--Hb_004784_020 Hb_066768_010--Hb_001250_060 Hb_031089_040 Hb_031089_040 Hb_066768_010--Hb_031089_040 Hb_066768_010--Hb_000326_090 Hb_000083_170 Hb_000083_170 Hb_066768_010--Hb_000083_170 Hb_005867_020 Hb_005867_020 Hb_066768_010--Hb_005867_020 Hb_003929_270 Hb_003929_270 Hb_001250_060--Hb_003929_270 Hb_129672_010 Hb_129672_010 Hb_001250_060--Hb_129672_010 Hb_000735_110 Hb_000735_110 Hb_001250_060--Hb_000735_110 Hb_001250_060--Hb_000326_090 Hb_000167_080 Hb_000167_080 Hb_001250_060--Hb_000167_080 Hb_006487_060 Hb_006487_060 Hb_007763_060--Hb_006487_060 Hb_152554_010 Hb_152554_010 Hb_007763_060--Hb_152554_010 Hb_028420_020 Hb_028420_020 Hb_007763_060--Hb_028420_020 Hb_002482_060 Hb_002482_060 Hb_007763_060--Hb_002482_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
8.72794 2.5192 6.35553 26.637 14.9367 35.9194
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
13.327 15.453 16.518 10.2636 10.0064

CAGE analysis