Hb_006642_040

Information

Type -
Description -
Location Contig6642: 24797-28274
Sequence    

Annotation

kegg
ID rcu:RCOM_0516650
description catalytic, putative
nr
ID XP_012066487.1
description PREDICTED: uncharacterized protein LOC105629489 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067L2S0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23676 PE=4 SV=1
Gene Ontology
ID GO:0016787
description alpha beta-hydrolases superfamily protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_53149: 25052-28238
cDNA
(Sanger)
(ID:Location)		 052_J13.ab1: 26627-28238

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_006642_040 0.0 - - PREDICTED: uncharacterized protein LOC105629489 [Jatropha curcas]
2 Hb_000497_110 0.0920351416 - - PREDICTED: uncharacterized protein LOC105647268 [Jatropha curcas]
3 Hb_007943_130 0.0958882739 - - 3-hydroxyacyl-CoA dehyrogenase, putative [Ricinus communis]
4 Hb_015175_020 0.1055980715 - - hypothetical protein JCGZ_14452 [Jatropha curcas]
5 Hb_011671_180 0.1061208728 - - PREDICTED: probable quinone oxidoreductase [Jatropha curcas]
6 Hb_001009_170 0.1083427525 - - Anthranilate N-benzoyltransferase protein, putative [Ricinus communis]
7 Hb_023001_060 0.109316676 - - PREDICTED: importin-11 [Jatropha curcas]
8 Hb_004994_220 0.1114727951 - - PREDICTED: K(+) efflux antiporter 2, chloroplastic-like isoform X2 [Jatropha curcas]
9 Hb_000580_190 0.1115219392 - - PREDICTED: methionine aminopeptidase 1A isoform X1 [Jatropha curcas]
10 Hb_001268_110 0.1128191208 - - PREDICTED: uncharacterized protein LOC105630183 isoform X2 [Jatropha curcas]
11 Hb_003294_090 0.1144302418 - - conserved hypothetical protein [Ricinus communis]
12 Hb_000999_050 0.1156964345 - - PREDICTED: eukaryotic translation initiation factor isoform 4G-1 isoform X1 [Jatropha curcas]
13 Hb_004920_120 0.1173048129 - - conserved hypothetical protein [Ricinus communis]
14 Hb_000123_210 0.1175479283 - - PREDICTED: uncharacterized protein LOC105641576 isoform X2 [Jatropha curcas]
15 Hb_011689_020 0.1179231283 - - protein phosphatase 2c, putative [Ricinus communis]
16 Hb_005054_100 0.1187951457 - - PREDICTED: uncharacterized protein At2g39920 [Jatropha curcas]
17 Hb_000031_120 0.119507802 - - PREDICTED: uncharacterized protein LOC105637488 [Jatropha curcas]
18 Hb_000264_170 0.1201051281 - - PREDICTED: uncharacterized protein LOC105649522 [Jatropha curcas]
19 Hb_090804_010 0.1201175613 - - ATP-dependent RNA helicase, putative [Ricinus communis]
20 Hb_000032_100 0.1207234086 - - PREDICTED: hydroquinone glucosyltransferase [Vitis vinifera]

Gene co-expression network

sample Hb_006642_040 Hb_006642_040 Hb_000497_110 Hb_000497_110 Hb_006642_040--Hb_000497_110 Hb_007943_130 Hb_007943_130 Hb_006642_040--Hb_007943_130 Hb_015175_020 Hb_015175_020 Hb_006642_040--Hb_015175_020 Hb_011671_180 Hb_011671_180 Hb_006642_040--Hb_011671_180 Hb_001009_170 Hb_001009_170 Hb_006642_040--Hb_001009_170 Hb_023001_060 Hb_023001_060 Hb_006642_040--Hb_023001_060 Hb_000497_110--Hb_011671_180 Hb_001157_110 Hb_001157_110 Hb_000497_110--Hb_001157_110 Hb_002000_080 Hb_002000_080 Hb_000497_110--Hb_002000_080 Hb_000497_110--Hb_001009_170 Hb_004837_130 Hb_004837_130 Hb_000497_110--Hb_004837_130 Hb_001894_150 Hb_001894_150 Hb_007943_130--Hb_001894_150 Hb_000123_210 Hb_000123_210 Hb_007943_130--Hb_000123_210 Hb_030116_020 Hb_030116_020 Hb_007943_130--Hb_030116_020 Hb_000206_250 Hb_000206_250 Hb_007943_130--Hb_000206_250 Hb_106371_010 Hb_106371_010 Hb_007943_130--Hb_106371_010 Hb_003294_090 Hb_003294_090 Hb_015175_020--Hb_003294_090 Hb_000999_050 Hb_000999_050 Hb_015175_020--Hb_000999_050 Hb_000028_480 Hb_000028_480 Hb_015175_020--Hb_000028_480 Hb_004724_150 Hb_004724_150 Hb_015175_020--Hb_004724_150 Hb_004607_050 Hb_004607_050 Hb_015175_020--Hb_004607_050 Hb_000832_020 Hb_000832_020 Hb_015175_020--Hb_000832_020 Hb_011671_180--Hb_002000_080 Hb_011671_180--Hb_001009_170 Hb_004920_120 Hb_004920_120 Hb_011671_180--Hb_004920_120 Hb_000252_200 Hb_000252_200 Hb_011671_180--Hb_000252_200 Hb_000031_120 Hb_000031_120 Hb_011671_180--Hb_000031_120 Hb_005490_030 Hb_005490_030 Hb_001009_170--Hb_005490_030 Hb_001009_170--Hb_004920_120 Hb_001959_210 Hb_001959_210 Hb_001009_170--Hb_001959_210 Hb_001619_070 Hb_001619_070 Hb_001009_170--Hb_001619_070 Hb_007044_140 Hb_007044_140 Hb_001009_170--Hb_007044_140 Hb_001344_010 Hb_001344_010 Hb_023001_060--Hb_001344_010 Hb_003777_310 Hb_003777_310 Hb_023001_060--Hb_003777_310 Hb_023001_060--Hb_005490_030 Hb_005054_100 Hb_005054_100 Hb_023001_060--Hb_005054_100 Hb_003697_030 Hb_003697_030 Hb_023001_060--Hb_003697_030 Hb_000318_290 Hb_000318_290 Hb_023001_060--Hb_000318_290
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
16.1648 9.62297 6.4556 13.5495 17.6059 32.0985
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
19.1868 12.0851 27.2114 36.1116 11.6348

CAGE analysis