Hb_000031_120

Information

Type -
Description -
Location Contig31: 100225-101287
Sequence    

Annotation

kegg
ID rcu:RCOM_0918990
description hypothetical protein
nr
ID XP_012076349.1
description PREDICTED: uncharacterized protein LOC105637488 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KMD7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07026 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_32780: 100213-101380
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000031_120 0.0 - - PREDICTED: uncharacterized protein LOC105637488 [Jatropha curcas]
2 Hb_000137_090 0.0776148153 - - PREDICTED: HAUS augmin-like complex subunit 3 [Vitis vinifera]
3 Hb_002000_080 0.0791184987 - - PREDICTED: polypyrimidine tract-binding protein homolog 3 isoform X2 [Jatropha curcas]
4 Hb_000139_290 0.0806549906 - - PREDICTED: peroxisomal adenine nucleotide carrier 1-like isoform X1 [Jatropha curcas]
5 Hb_001009_250 0.0814576677 - - PREDICTED: nucleoside diphosphate kinase 2, chloroplastic [Jatropha curcas]
6 Hb_031340_050 0.0843815333 - - PREDICTED: tropinone reductase 1-like isoform X1 [Jatropha curcas]
7 Hb_011671_180 0.0866331674 - - PREDICTED: probable quinone oxidoreductase [Jatropha curcas]
8 Hb_004410_030 0.0879556637 - - PREDICTED: protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 6, chloroplastic isoform X1 [Jatropha curcas]
9 Hb_019053_030 0.094193561 - - PREDICTED: sulfite oxidase [Jatropha curcas]
10 Hb_002471_290 0.094893828 - - PREDICTED: vacuolar fusion protein CCZ1 homolog isoform X1 [Jatropha curcas]
11 Hb_001357_250 0.0955541705 - - PREDICTED: UPF0505 protein C16orf62 homolog [Jatropha curcas]
12 Hb_003294_070 0.0957803634 - - hypothetical protein RCOM_1714550 [Ricinus communis]
13 Hb_004954_070 0.0968387646 - - PREDICTED: uncharacterized protein LOC105645187 [Jatropha curcas]
14 Hb_000032_280 0.0969420307 - - PREDICTED: long chain acyl-CoA synthetase 4-like [Jatropha curcas]
15 Hb_002197_050 0.0990055125 - - hypothetical protein CICLE_v10002157mg [Citrus clementina]
16 Hb_007380_060 0.1001357358 - - hypothetical protein POPTR_0006s00280g [Populus trichocarpa]
17 Hb_007017_090 0.1003526796 - - PREDICTED: coiled-coil domain-containing protein 186 [Jatropha curcas]
18 Hb_009079_030 0.1012613174 - - PREDICTED: general transcription factor IIF subunit 2 [Jatropha curcas]
19 Hb_005147_030 0.1014701779 - - hypothetical protein POPTR_0004s23390g [Populus trichocarpa]
20 Hb_000252_170 0.1026972216 - - PREDICTED: uncharacterized protein LOC105644650 isoform X2 [Jatropha curcas]

Gene co-expression network

sample Hb_000031_120 Hb_000031_120 Hb_000137_090 Hb_000137_090 Hb_000031_120--Hb_000137_090 Hb_002000_080 Hb_002000_080 Hb_000031_120--Hb_002000_080 Hb_000139_290 Hb_000139_290 Hb_000031_120--Hb_000139_290 Hb_001009_250 Hb_001009_250 Hb_000031_120--Hb_001009_250 Hb_031340_050 Hb_031340_050 Hb_000031_120--Hb_031340_050 Hb_011671_180 Hb_011671_180 Hb_000031_120--Hb_011671_180 Hb_002197_050 Hb_002197_050 Hb_000137_090--Hb_002197_050 Hb_000137_090--Hb_031340_050 Hb_001357_250 Hb_001357_250 Hb_000137_090--Hb_001357_250 Hb_000137_090--Hb_000139_290 Hb_000137_090--Hb_001009_250 Hb_165928_030 Hb_165928_030 Hb_002000_080--Hb_165928_030 Hb_002000_080--Hb_011671_180 Hb_002481_080 Hb_002481_080 Hb_002000_080--Hb_002481_080 Hb_073973_100 Hb_073973_100 Hb_002000_080--Hb_073973_100 Hb_006907_130 Hb_006907_130 Hb_002000_080--Hb_006907_130 Hb_003294_070 Hb_003294_070 Hb_002000_080--Hb_003294_070 Hb_007017_090 Hb_007017_090 Hb_000139_290--Hb_007017_090 Hb_000139_290--Hb_001009_250 Hb_004410_030 Hb_004410_030 Hb_000139_290--Hb_004410_030 Hb_000139_290--Hb_001357_250 Hb_007390_010 Hb_007390_010 Hb_000139_290--Hb_007390_010 Hb_001009_250--Hb_007017_090 Hb_001009_250--Hb_001357_250 Hb_001009_250--Hb_004410_030 Hb_031340_050--Hb_001357_250 Hb_031340_050--Hb_002197_050 Hb_001579_220 Hb_001579_220 Hb_031340_050--Hb_001579_220 Hb_000252_170 Hb_000252_170 Hb_031340_050--Hb_000252_170 Hb_023732_030 Hb_023732_030 Hb_031340_050--Hb_023732_030 Hb_000497_110 Hb_000497_110 Hb_011671_180--Hb_000497_110 Hb_001009_170 Hb_001009_170 Hb_011671_180--Hb_001009_170 Hb_004920_120 Hb_004920_120 Hb_011671_180--Hb_004920_120 Hb_000252_200 Hb_000252_200 Hb_011671_180--Hb_000252_200
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
29.8211 20.1885 21.0296 20.8466 32.0276 47.0009
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
41.9987 38.7187 31.6557 72.0517 29.2015

CAGE analysis