Hb_005862_030

Information

Type -
Description -
Location Contig5862: 15264-21998
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005862_030 0.0 - - -
2 Hb_002539_080 0.1522805267 - - PREDICTED: triose phosphate/phosphate translocator, chloroplastic-like [Jatropha curcas]
3 Hb_001912_010 0.165791754 - - PREDICTED: uncharacterized protein LOC105636600 [Jatropha curcas]
4 Hb_001439_170 0.1695879973 - - PREDICTED: pectinesterase 31-like isoform X2 [Jatropha curcas]
5 Hb_024714_060 0.1724444559 - - PREDICTED: thiamine pyrophosphokinase 1 isoform X1 [Jatropha curcas]
6 Hb_000012_130 0.17407685 - - PREDICTED: uncharacterized protein LOC100807540 isoform X2 [Glycine max]
7 Hb_009265_060 0.1756412997 - - PREDICTED: pyruvate kinase, cytosolic isozyme [Jatropha curcas]
8 Hb_044662_070 0.1770174835 - - PREDICTED: hsp70-Hsp90 organizing protein 3 [Jatropha curcas]
9 Hb_002909_060 0.1776726181 - - 3-5 exonuclease, putative [Ricinus communis]
10 Hb_002282_020 0.1783404303 - - PREDICTED: uncharacterized protein LOC105629828 [Jatropha curcas]
11 Hb_005918_030 0.1809234838 - - hypothetical protein JCGZ_24769 [Jatropha curcas]
12 Hb_000634_100 0.1831099825 - - hypothetical protein PRUPE_ppa013350mg [Prunus persica]
13 Hb_000905_200 0.1842373987 - - PREDICTED: zinc finger A20 and AN1 domain-containing stress-associated protein 5 [Jatropha curcas]
14 Hb_054127_040 0.1843882945 - - PREDICTED: 2-hydroxyacyl-CoA lyase [Jatropha curcas]
15 Hb_000261_080 0.1848024442 - - PREDICTED: uncharacterized protein LOC105633150 isoform X1 [Jatropha curcas]
16 Hb_006573_220 0.1864383759 - - PREDICTED: trafficking protein particle complex subunit 1 [Jatropha curcas]
17 Hb_000035_430 0.1871308798 - - PREDICTED: protein ENHANCED DISEASE RESISTANCE 2-like [Jatropha curcas]
18 Hb_010172_070 0.1883084711 - - PREDICTED: ELL-associated factor 1 [Jatropha curcas]
19 Hb_001999_150 0.1885434131 - - 60S acidic ribosomal protein P0, putative [Ricinus communis]
20 Hb_007594_120 0.1886449076 transcription factor TF Family: MIKC MADS-box transcription factor 2 [Hevea brasiliensis]

Gene co-expression network

sample Hb_005862_030 Hb_005862_030 Hb_002539_080 Hb_002539_080 Hb_005862_030--Hb_002539_080 Hb_001912_010 Hb_001912_010 Hb_005862_030--Hb_001912_010 Hb_001439_170 Hb_001439_170 Hb_005862_030--Hb_001439_170 Hb_024714_060 Hb_024714_060 Hb_005862_030--Hb_024714_060 Hb_000012_130 Hb_000012_130 Hb_005862_030--Hb_000012_130 Hb_009265_060 Hb_009265_060 Hb_005862_030--Hb_009265_060 Hb_002282_020 Hb_002282_020 Hb_002539_080--Hb_002282_020 Hb_001711_030 Hb_001711_030 Hb_002539_080--Hb_001711_030 Hb_002527_070 Hb_002527_070 Hb_002539_080--Hb_002527_070 Hb_002735_060 Hb_002735_060 Hb_002539_080--Hb_002735_060 Hb_001863_480 Hb_001863_480 Hb_002539_080--Hb_001863_480 Hb_002539_080--Hb_001439_170 Hb_000212_260 Hb_000212_260 Hb_001912_010--Hb_000212_260 Hb_007479_020 Hb_007479_020 Hb_001912_010--Hb_007479_020 Hb_010172_070 Hb_010172_070 Hb_001912_010--Hb_010172_070 Hb_006573_220 Hb_006573_220 Hb_001912_010--Hb_006573_220 Hb_000329_330 Hb_000329_330 Hb_001912_010--Hb_000329_330 Hb_003376_030 Hb_003376_030 Hb_001912_010--Hb_003376_030 Hb_001439_170--Hb_000012_130 Hb_001439_170--Hb_001711_030 Hb_001439_170--Hb_001863_480 Hb_002119_120 Hb_002119_120 Hb_001439_170--Hb_002119_120 Hb_044662_070 Hb_044662_070 Hb_001439_170--Hb_044662_070 Hb_001006_180 Hb_001006_180 Hb_024714_060--Hb_001006_180 Hb_024714_060--Hb_009265_060 Hb_024714_060--Hb_000012_130 Hb_001762_060 Hb_001762_060 Hb_024714_060--Hb_001762_060 Hb_007594_120 Hb_007594_120 Hb_024714_060--Hb_007594_120 Hb_006831_030 Hb_006831_030 Hb_024714_060--Hb_006831_030 Hb_000012_130--Hb_007594_120 Hb_002027_400 Hb_002027_400 Hb_000012_130--Hb_002027_400 Hb_002759_230 Hb_002759_230 Hb_000012_130--Hb_002759_230 Hb_001160_030 Hb_001160_030 Hb_000012_130--Hb_001160_030 Hb_012573_030 Hb_012573_030 Hb_009265_060--Hb_012573_030 Hb_004048_050 Hb_004048_050 Hb_009265_060--Hb_004048_050 Hb_171554_080 Hb_171554_080 Hb_009265_060--Hb_171554_080 Hb_000419_040 Hb_000419_040 Hb_009265_060--Hb_000419_040 Hb_009265_060--Hb_001006_180
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.50634 0.352822 1.4652 1.68416 2.45044 0.807689
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
5.29355 3.90224 5.3719 0.757763 0

CAGE analysis