Hb_009265_060

Information

Type -
Description -
Location Contig9265: 97665-101165
Sequence    

Annotation

kegg
ID rcu:RCOM_0342830
description pyruvate kinase, putative (EC:2.7.1.40)
nr
ID XP_012091717.1
description PREDICTED: pyruvate kinase, cytosolic isozyme [Jatropha curcas]
swissprot
ID Q42954
description Pyruvate kinase, cytosolic isozyme OS=Nicotiana tabacum PE=2 SV=1
trembl
ID A0A067JE58
description Pyruvate kinase OS=Jatropha curcas GN=JCGZ_21519 PE=3 SV=1
Gene Ontology
ID GO:0000287
description pyruvate cytosolic isozyme

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_62712: 97786-101151
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_009265_060 0.0 - - PREDICTED: pyruvate kinase, cytosolic isozyme [Jatropha curcas]
2 Hb_024714_060 0.0839794631 - - PREDICTED: thiamine pyrophosphokinase 1 isoform X1 [Jatropha curcas]
3 Hb_012573_030 0.0841680472 - - conserved hypothetical protein [Ricinus communis]
4 Hb_004048_050 0.0954515254 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570-like [Citrus sinensis]
5 Hb_171554_080 0.0994961447 - - PREDICTED: uncharacterized protein At1g04910 [Jatropha curcas]
6 Hb_000419_040 0.1013387798 - - chorismate synthase [Hevea brasiliensis]
7 Hb_001006_180 0.1016010759 - - PREDICTED: endonuclease V-like [Jatropha curcas]
8 Hb_002539_080 0.1018136783 - - PREDICTED: triose phosphate/phosphate translocator, chloroplastic-like [Jatropha curcas]
9 Hb_001762_060 0.1054367447 - - pantothenate kinase, putative [Ricinus communis]
10 Hb_054865_130 0.1058728263 - - acyltransferase, putative [Ricinus communis]
11 Hb_012522_030 0.1081756238 - - ankyrin repeat-containing protein, putative [Ricinus communis]
12 Hb_002936_050 0.1137120689 transcription factor TF Family: ARR-B PREDICTED: two-component response regulator ARR18 isoform X2 [Jatropha curcas]
13 Hb_001863_480 0.1162163855 - - PREDICTED: uncharacterized protein LOC105630612 [Jatropha curcas]
14 Hb_010589_040 0.1166395237 - - conserved hypothetical protein [Ricinus communis]
15 Hb_001711_030 0.1193836037 - - PREDICTED: uncharacterized protein LOC105642409 [Jatropha curcas]
16 Hb_001278_050 0.1205959236 - - PREDICTED: uncharacterized protein LOC105636924 [Jatropha curcas]
17 Hb_000032_040 0.1215793497 - - PREDICTED: mitochondrial adenine nucleotide transporter ADNT1 [Jatropha curcas]
18 Hb_002291_030 0.1220743457 - - PREDICTED: vesicle transport protein SFT2B [Jatropha curcas]
19 Hb_002527_070 0.1234719134 - - axonemal dynein light chain, putative [Ricinus communis]
20 Hb_004077_030 0.1259827819 - - hypothetical protein EUGRSUZ_K01571 [Eucalyptus grandis]

Gene co-expression network

sample Hb_009265_060 Hb_009265_060 Hb_024714_060 Hb_024714_060 Hb_009265_060--Hb_024714_060 Hb_012573_030 Hb_012573_030 Hb_009265_060--Hb_012573_030 Hb_004048_050 Hb_004048_050 Hb_009265_060--Hb_004048_050 Hb_171554_080 Hb_171554_080 Hb_009265_060--Hb_171554_080 Hb_000419_040 Hb_000419_040 Hb_009265_060--Hb_000419_040 Hb_001006_180 Hb_001006_180 Hb_009265_060--Hb_001006_180 Hb_024714_060--Hb_001006_180 Hb_000012_130 Hb_000012_130 Hb_024714_060--Hb_000012_130 Hb_001762_060 Hb_001762_060 Hb_024714_060--Hb_001762_060 Hb_007594_120 Hb_007594_120 Hb_024714_060--Hb_007594_120 Hb_006831_030 Hb_006831_030 Hb_024714_060--Hb_006831_030 Hb_012573_030--Hb_171554_080 Hb_054865_130 Hb_054865_130 Hb_012573_030--Hb_054865_130 Hb_012573_030--Hb_001006_180 Hb_012573_030--Hb_004048_050 Hb_012573_030--Hb_024714_060 Hb_004048_050--Hb_054865_130 Hb_004048_050--Hb_024714_060 Hb_004048_050--Hb_171554_080 Hb_012725_110 Hb_012725_110 Hb_004048_050--Hb_012725_110 Hb_001863_480 Hb_001863_480 Hb_171554_080--Hb_001863_480 Hb_171554_080--Hb_054865_130 Hb_012522_030 Hb_012522_030 Hb_171554_080--Hb_012522_030 Hb_171554_080--Hb_000419_040 Hb_000419_040--Hb_012522_030 Hb_002936_050 Hb_002936_050 Hb_000419_040--Hb_002936_050 Hb_000419_040--Hb_001863_480 Hb_000345_030 Hb_000345_030 Hb_000419_040--Hb_000345_030 Hb_001006_180--Hb_001762_060 Hb_012423_050 Hb_012423_050 Hb_001006_180--Hb_012423_050 Hb_001006_180--Hb_006831_030 Hb_000398_160 Hb_000398_160 Hb_001006_180--Hb_000398_160 Hb_162275_030 Hb_162275_030 Hb_001006_180--Hb_162275_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
111.214 12.0666 13.2357 32.4911 42.7931 53.4852
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
195.81 139.223 229.654 33.5532 8.53236

CAGE analysis