Hb_005098_010

Information

Type -
Description -
Location Contig5098: 25823-29834
Sequence    

Annotation

kegg
ID rcu:RCOM_1087090
description aminoadipate-semialdehyde dehydrogenase, putative
nr
ID XP_012065756.1
description PREDICTED: L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase-like [Jatropha curcas]
swissprot
ID B2RYJ4
description L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase OS=Rattus norvegicus GN=Aasdhppt PE=2 SV=1
trembl
ID A0A067LGT3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26494 PE=4 SV=1
Gene Ontology
ID GO:0000287
description l-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_46233: 25893-28472 , PASA_asmbl_46234: 28479-29549
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005098_010 0.0 - - PREDICTED: L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase-like [Jatropha curcas]
2 Hb_003375_070 0.0723684879 - - PREDICTED: alkylated DNA repair protein alkB homolog 8 [Jatropha curcas]
3 Hb_001135_220 0.0732668197 - - FGFR1 oncogene partner, putative [Ricinus communis]
4 Hb_000526_050 0.0748746392 - - PREDICTED: chaperone protein dnaJ 1, mitochondrial [Jatropha curcas]
5 Hb_001300_070 0.0794390564 - - OTU domain-containing protein 6B, putative [Ricinus communis]
6 Hb_002273_120 0.0904920427 - - PREDICTED: probable apyrase 6 [Jatropha curcas]
7 Hb_002785_050 0.0957559699 - - PREDICTED: adenylosuccinate lyase-like [Jatropha curcas]
8 Hb_004412_010 0.0976421965 - - -
9 Hb_001341_120 0.099997081 - - hypothetical protein B456_001G130300 [Gossypium raimondii]
10 Hb_000023_220 0.1027360698 transcription factor TF Family: C3H PREDICTED: zinc finger CCCH domain-containing protein 18 isoform X1 [Jatropha curcas]
11 Hb_004032_410 0.103960753 transcription factor TF Family: ARID PREDICTED: AT-rich interactive domain-containing protein 5 isoform X2 [Jatropha curcas]
12 Hb_004117_130 0.105225892 - - PREDICTED: uncharacterized protein LOC105649104 [Jatropha curcas]
13 Hb_000913_050 0.1053999415 - - hypothetical protein JCGZ_17329 [Jatropha curcas]
14 Hb_002947_030 0.1057823227 - - PREDICTED: uncharacterized protein LOC105633529 [Jatropha curcas]
15 Hb_003018_130 0.1061906245 - - PREDICTED: uncharacterized protein LOC105628777 [Jatropha curcas]
16 Hb_002716_130 0.1064527376 - - PREDICTED: uncharacterized protein LOC105645470 isoform X2 [Jatropha curcas]
17 Hb_003847_130 0.1070113983 - - cytochrome C oxidase assembly protein cox11, putative [Ricinus communis]
18 Hb_000345_240 0.10798652 - - PREDICTED: cyclin-H1-1 [Jatropha curcas]
19 Hb_000074_080 0.1081332416 - - unknown [Populus trichocarpa]
20 Hb_007632_240 0.1093774585 - - transporter, putative [Ricinus communis]

Gene co-expression network

sample Hb_005098_010 Hb_005098_010 Hb_003375_070 Hb_003375_070 Hb_005098_010--Hb_003375_070 Hb_001135_220 Hb_001135_220 Hb_005098_010--Hb_001135_220 Hb_000526_050 Hb_000526_050 Hb_005098_010--Hb_000526_050 Hb_001300_070 Hb_001300_070 Hb_005098_010--Hb_001300_070 Hb_002273_120 Hb_002273_120 Hb_005098_010--Hb_002273_120 Hb_002785_050 Hb_002785_050 Hb_005098_010--Hb_002785_050 Hb_003375_070--Hb_001135_220 Hb_000139_370 Hb_000139_370 Hb_003375_070--Hb_000139_370 Hb_011930_160 Hb_011930_160 Hb_003375_070--Hb_011930_160 Hb_003375_070--Hb_002273_120 Hb_003025_110 Hb_003025_110 Hb_003375_070--Hb_003025_110 Hb_007632_240 Hb_007632_240 Hb_003375_070--Hb_007632_240 Hb_000342_130 Hb_000342_130 Hb_001135_220--Hb_000342_130 Hb_004414_060 Hb_004414_060 Hb_001135_220--Hb_004414_060 Hb_003847_130 Hb_003847_130 Hb_001135_220--Hb_003847_130 Hb_123915_040 Hb_123915_040 Hb_001135_220--Hb_123915_040 Hb_001579_320 Hb_001579_320 Hb_000526_050--Hb_001579_320 Hb_007594_130 Hb_007594_130 Hb_000526_050--Hb_007594_130 Hb_040262_010 Hb_040262_010 Hb_000526_050--Hb_040262_010 Hb_004881_020 Hb_004881_020 Hb_000526_050--Hb_004881_020 Hb_000526_050--Hb_003375_070 Hb_000076_270 Hb_000076_270 Hb_001300_070--Hb_000076_270 Hb_002273_130 Hb_002273_130 Hb_001300_070--Hb_002273_130 Hb_001341_120 Hb_001341_120 Hb_001300_070--Hb_001341_120 Hb_000059_150 Hb_000059_150 Hb_001300_070--Hb_000059_150 Hb_008595_010 Hb_008595_010 Hb_001300_070--Hb_008595_010 Hb_009529_030 Hb_009529_030 Hb_002273_120--Hb_009529_030 Hb_002273_120--Hb_002785_050 Hb_003010_020 Hb_003010_020 Hb_002273_120--Hb_003010_020 Hb_032050_040 Hb_032050_040 Hb_002273_120--Hb_032050_040 Hb_017295_010 Hb_017295_010 Hb_002273_120--Hb_017295_010 Hb_002785_050--Hb_009529_030 Hb_002785_050--Hb_032050_040 Hb_000830_030 Hb_000830_030 Hb_002785_050--Hb_000830_030 Hb_001882_050 Hb_001882_050 Hb_002785_050--Hb_001882_050 Hb_000260_330 Hb_000260_330 Hb_002785_050--Hb_000260_330
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
7.13147 4.11183 5.43099 7.69811 15.396 12.7184
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
6.60485 8.68934 4.67894 7.82708 8.73971

CAGE analysis