Hb_004567_100

Information

Type -
Description -
Location Contig4567: 59506-62218
Sequence    

Annotation

kegg
ID rcu:RCOM_1719350
description hypothetical protein
nr
ID XP_012085833.1
description PREDICTED: uncharacterized protein LOC105644934 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067K280
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17528 PE=4 SV=1
Gene Ontology
ID GO:0006950
description amino acid--

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004567_100 0.0 - - PREDICTED: uncharacterized protein LOC105644934 [Jatropha curcas]
2 Hb_005214_160 0.0887119027 - - PREDICTED: heat shock 70 kDa protein, mitochondrial [Jatropha curcas]
3 Hb_002701_080 0.0969553734 - - PREDICTED: E3 ubiquitin-protein ligase At3g02290-like [Jatropha curcas]
4 Hb_012654_010 0.102006493 transcription factor TF Family: MYB-related PREDICTED: uncharacterized protein LOC105629849 [Jatropha curcas]
5 Hb_000059_150 0.1022868009 - - Polynucleotidyl transferase, ribonuclease H-like superfamily protein isoform 2 [Theobroma cacao]
6 Hb_003506_080 0.1054940393 - - dipeptidyl peptidase IV, putative [Ricinus communis]
7 Hb_000270_140 0.1066687098 - - PREDICTED: uncharacterized protein LOC105640478 isoform X1 [Jatropha curcas]
8 Hb_017711_020 0.1088010435 - - PREDICTED: cysteine-rich repeat secretory protein 56 isoform X1 [Jatropha curcas]
9 Hb_005228_080 0.1091860593 - - PREDICTED: cleavage and polyadenylation specificity factor subunit 3-I [Jatropha curcas]
10 Hb_005895_040 0.1092831975 - - PREDICTED: tRNA threonylcarbamoyladenosine dehydratase [Jatropha curcas]
11 Hb_188964_010 0.1110053935 - - maintenance of killer 16 (mak16) protein, putative [Ricinus communis]
12 Hb_000977_180 0.111321828 - - PREDICTED: splicing factor U2AF-associated protein 2 isoform X1 [Jatropha curcas]
13 Hb_009620_040 0.1114465929 - - PREDICTED: cyclin-T1-3-like [Jatropha curcas]
14 Hb_000940_040 0.111862321 - - PREDICTED: protein XAP5 CIRCADIAN TIMEKEEPER isoform X1 [Jatropha curcas]
15 Hb_000398_190 0.1119802395 - - PREDICTED: outer envelope protein 64, mitochondrial [Jatropha curcas]
16 Hb_000906_060 0.1127541359 - - PREDICTED: putative pentatricopeptide repeat-containing protein At3g08820 [Populus euphratica]
17 Hb_001504_160 0.1132490347 - - PREDICTED: nuclear pore complex protein NUP96 [Jatropha curcas]
18 Hb_011612_010 0.1138618304 - - PREDICTED: zinc finger CCCH domain-containing protein 48-like [Jatropha curcas]
19 Hb_007441_070 0.11780153 - - hypothetical protein PRUPE_ppa004494mg [Prunus persica]
20 Hb_003097_190 0.1193602825 transcription factor TF Family: GRAS PREDICTED: scarecrow-like protein 3 [Jatropha curcas]

Gene co-expression network

sample Hb_004567_100 Hb_004567_100 Hb_005214_160 Hb_005214_160 Hb_004567_100--Hb_005214_160 Hb_002701_080 Hb_002701_080 Hb_004567_100--Hb_002701_080 Hb_012654_010 Hb_012654_010 Hb_004567_100--Hb_012654_010 Hb_000059_150 Hb_000059_150 Hb_004567_100--Hb_000059_150 Hb_003506_080 Hb_003506_080 Hb_004567_100--Hb_003506_080 Hb_000270_140 Hb_000270_140 Hb_004567_100--Hb_000270_140 Hb_005214_160--Hb_012654_010 Hb_000977_180 Hb_000977_180 Hb_005214_160--Hb_000977_180 Hb_009620_040 Hb_009620_040 Hb_005214_160--Hb_009620_040 Hb_007364_010 Hb_007364_010 Hb_005214_160--Hb_007364_010 Hb_002097_090 Hb_002097_090 Hb_005214_160--Hb_002097_090 Hb_011612_010 Hb_011612_010 Hb_002701_080--Hb_011612_010 Hb_000398_190 Hb_000398_190 Hb_002701_080--Hb_000398_190 Hb_002701_080--Hb_012654_010 Hb_001504_160 Hb_001504_160 Hb_002701_080--Hb_001504_160 Hb_002701_080--Hb_009620_040 Hb_000230_330 Hb_000230_330 Hb_002701_080--Hb_000230_330 Hb_012654_010--Hb_001504_160 Hb_000107_100 Hb_000107_100 Hb_012654_010--Hb_000107_100 Hb_000139_250 Hb_000139_250 Hb_012654_010--Hb_000139_250 Hb_001057_010 Hb_001057_010 Hb_012654_010--Hb_001057_010 Hb_000173_510 Hb_000173_510 Hb_000059_150--Hb_000173_510 Hb_000743_040 Hb_000743_040 Hb_000059_150--Hb_000743_040 Hb_002273_130 Hb_002273_130 Hb_000059_150--Hb_002273_130 Hb_000600_070 Hb_000600_070 Hb_000059_150--Hb_000600_070 Hb_010381_060 Hb_010381_060 Hb_000059_150--Hb_010381_060 Hb_004450_010 Hb_004450_010 Hb_000059_150--Hb_004450_010 Hb_007108_030 Hb_007108_030 Hb_003506_080--Hb_007108_030 Hb_003506_080--Hb_000977_180 Hb_003506_080--Hb_009620_040 Hb_000815_210 Hb_000815_210 Hb_003506_080--Hb_000815_210 Hb_001866_110 Hb_001866_110 Hb_003506_080--Hb_001866_110 Hb_002079_010 Hb_002079_010 Hb_003506_080--Hb_002079_010 Hb_000906_060 Hb_000906_060 Hb_000270_140--Hb_000906_060 Hb_017711_020 Hb_017711_020 Hb_000270_140--Hb_017711_020 Hb_000270_140--Hb_005214_160 Hb_003097_190 Hb_003097_190 Hb_000270_140--Hb_003097_190 Hb_000422_140 Hb_000422_140 Hb_000270_140--Hb_000422_140
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.80106 2.31911 0.855675 1.48699 8.48745 6.86614
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
2.36247 2.22941 2.11871 2.5297 1.22355

CAGE analysis