Hb_004030_050

Information

Type -
Description -
Location Contig4030: 59226-64678
Sequence    

Annotation

kegg
ID mdm:103407789
description uncharacterized LOC103407789
nr
ID XP_012087989.1
description PREDICTED: uncharacterized protein LOC105646691 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JX14
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25109 PE=4 SV=1
Gene Ontology
ID GO:0009507
description PREDICTED: uncharacterized protein LOC105646691

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004030_050 0.0 - - PREDICTED: uncharacterized protein LOC105646691 [Jatropha curcas]
2 Hb_000116_170 0.1054543757 - - hypothetical protein JCGZ_22392 [Jatropha curcas]
3 Hb_009118_010 0.105583672 - - methionine aminopeptidase, putative [Ricinus communis]
4 Hb_004837_190 0.1067581344 - - PREDICTED: uncharacterized protein LOC105648286 [Jatropha curcas]
5 Hb_123954_010 0.1077522511 - - PREDICTED: plastidic glucose transporter 4 [Jatropha curcas]
6 Hb_014361_100 0.1097325377 - - PREDICTED: casein kinase II subunit alpha [Cicer arietinum]
7 Hb_006922_080 0.1125222159 - - PREDICTED: E3 ubiquitin-protein ligase SINAT3-like [Glycine max]
8 Hb_022256_040 0.1143633192 - - PREDICTED: probable E3 ubiquitin-protein ligase rbrA isoform X2 [Jatropha curcas]
9 Hb_007407_040 0.1149706474 - - ankyrin repeat-containing protein, putative [Ricinus communis]
10 Hb_000429_200 0.115426529 - - PREDICTED: DNA-binding protein SMUBP-2 [Jatropha curcas]
11 Hb_009775_050 0.1165748407 transcription factor TF Family: Orphans hypothetical protein RCOM_0575190 [Ricinus communis]
12 Hb_002067_040 0.117277326 - - dihydrodipicolinate reductase, putative [Ricinus communis]
13 Hb_006663_100 0.1183910861 - - hypothetical protein JCGZ_06980 [Jatropha curcas]
14 Hb_002675_060 0.1189939494 - - PREDICTED: uncharacterized protein LOC105634954 isoform X2 [Jatropha curcas]
15 Hb_143629_010 0.1191510537 - - transferase, transferring glycosyl groups, putative [Ricinus communis]
16 Hb_000933_090 0.119292163 - - PREDICTED: probable protein S-acyltransferase 22 [Jatropha curcas]
17 Hb_003656_130 0.1196365321 - - PREDICTED: protein bem46 isoform X2 [Jatropha curcas]
18 Hb_002587_020 0.1211855892 - - nucleic acid binding protein, putative [Ricinus communis]
19 Hb_001221_040 0.1220399412 - - PREDICTED: nucleolar protein 56-like [Jatropha curcas]
20 Hb_020719_030 0.122525284 - - PREDICTED: ER membrane protein complex subunit 3-like [Jatropha curcas]

Gene co-expression network

sample Hb_004030_050 Hb_004030_050 Hb_000116_170 Hb_000116_170 Hb_004030_050--Hb_000116_170 Hb_009118_010 Hb_009118_010 Hb_004030_050--Hb_009118_010 Hb_004837_190 Hb_004837_190 Hb_004030_050--Hb_004837_190 Hb_123954_010 Hb_123954_010 Hb_004030_050--Hb_123954_010 Hb_014361_100 Hb_014361_100 Hb_004030_050--Hb_014361_100 Hb_006922_080 Hb_006922_080 Hb_004030_050--Hb_006922_080 Hb_004608_020 Hb_004608_020 Hb_000116_170--Hb_004608_020 Hb_000631_150 Hb_000631_150 Hb_000116_170--Hb_000631_150 Hb_000116_170--Hb_006922_080 Hb_025557_020 Hb_025557_020 Hb_000116_170--Hb_025557_020 Hb_000849_100 Hb_000849_100 Hb_000116_170--Hb_000849_100 Hb_000116_170--Hb_009118_010 Hb_003602_040 Hb_003602_040 Hb_009118_010--Hb_003602_040 Hb_009118_010--Hb_004608_020 Hb_000012_090 Hb_000012_090 Hb_009118_010--Hb_000012_090 Hb_000322_050 Hb_000322_050 Hb_009118_010--Hb_000322_050 Hb_003434_060 Hb_003434_060 Hb_009118_010--Hb_003434_060 Hb_000956_030 Hb_000956_030 Hb_009118_010--Hb_000956_030 Hb_006620_020 Hb_006620_020 Hb_004837_190--Hb_006620_020 Hb_031527_100 Hb_031527_100 Hb_004837_190--Hb_031527_100 Hb_001341_120 Hb_001341_120 Hb_004837_190--Hb_001341_120 Hb_000913_050 Hb_000913_050 Hb_004837_190--Hb_000913_050 Hb_000538_100 Hb_000538_100 Hb_004837_190--Hb_000538_100 Hb_000618_030 Hb_000618_030 Hb_004837_190--Hb_000618_030 Hb_020719_030 Hb_020719_030 Hb_123954_010--Hb_020719_030 Hb_002272_180 Hb_002272_180 Hb_123954_010--Hb_002272_180 Hb_033834_060 Hb_033834_060 Hb_123954_010--Hb_033834_060 Hb_003090_080 Hb_003090_080 Hb_123954_010--Hb_003090_080 Hb_004450_010 Hb_004450_010 Hb_123954_010--Hb_004450_010 Hb_003656_130 Hb_003656_130 Hb_123954_010--Hb_003656_130 Hb_000329_390 Hb_000329_390 Hb_014361_100--Hb_000329_390 Hb_001348_050 Hb_001348_050 Hb_014361_100--Hb_001348_050 Hb_000236_380 Hb_000236_380 Hb_014361_100--Hb_000236_380 Hb_001584_290 Hb_001584_290 Hb_014361_100--Hb_001584_290 Hb_000322_090 Hb_000322_090 Hb_014361_100--Hb_000322_090 Hb_000042_270 Hb_000042_270 Hb_014361_100--Hb_000042_270 Hb_006922_080--Hb_000012_090 Hb_003453_020 Hb_003453_020 Hb_006922_080--Hb_003453_020 Hb_000176_110 Hb_000176_110 Hb_006922_080--Hb_000176_110 Hb_006922_080--Hb_009118_010 Hb_006922_080--Hb_003656_130
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
63.1185 11.368 23.2201 23.823 95.424 64.2414
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
53.074 22.6039 37.7125 43.6673 16.1014

CAGE analysis