Hb_003747_040

Information

Type -
Description -
Location Contig3747: 24654-24929
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003747_040 0.0 - - -
2 Hb_015026_120 0.1159311695 - - hypothetical protein TRIUR3_03502 [Triticum urartu]
3 Hb_001274_030 0.1169451728 - - PREDICTED: uncharacterized protein LOC105628035 [Jatropha curcas]
4 Hb_003777_270 0.1181667839 - - 60S ribosomal protein L3B [Hevea brasiliensis]
5 Hb_002890_280 0.1217917761 - - hypothetical protein PRUPE_ppa009665mg [Prunus persica]
6 Hb_000243_280 0.1229054994 - - -
7 Hb_000510_090 0.1236492362 - - 40S ribosomal protein S15 [Morus notabilis]
8 Hb_004724_100 0.1270730661 - - 60S ribosomal protein L10aA [Hevea brasiliensis]
9 Hb_001840_080 0.128273928 - - hypothetical protein POPTR_0008s14370g [Populus trichocarpa]
10 Hb_000442_100 0.1284766378 - - PREDICTED: staphylococcal-like nuclease CAN2 [Jatropha curcas]
11 Hb_001609_030 0.1308220459 - - PREDICTED: protein ENHANCED DISEASE RESISTANCE 2 isoform X2 [Jatropha curcas]
12 Hb_001248_050 0.1316120066 - - PREDICTED: PXMP2/4 family protein 4-like [Jatropha curcas]
13 Hb_133271_020 0.131668508 - - prohibitin, putative [Ricinus communis]
14 Hb_023732_070 0.1322520527 - - PREDICTED: 60S acidic ribosomal protein P2B-like [Populus euphratica]
15 Hb_002375_020 0.1324632974 - - PREDICTED: ankyrin repeat domain-containing protein 65-like [Jatropha curcas]
16 Hb_000442_160 0.1331174317 - - alpha-soluble nsf attachment protein, putative [Ricinus communis]
17 Hb_000975_290 0.1331997423 - - PREDICTED: 40S ribosomal protein S15a-1 [Jatropha curcas]
18 Hb_001252_110 0.1341003258 - - PREDICTED: uncharacterized protein At2g39795, mitochondrial-like [Jatropha curcas]
19 Hb_009111_050 0.1343758164 transcription factor TF Family: Jumonji PREDICTED: pentatricopeptide repeat-containing protein At5g06540 [Populus euphratica]
20 Hb_023226_010 0.1359701989 transcription factor TF Family: NF-YA PREDICTED: nuclear transcription factor Y subunit A-7-like isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_003747_040 Hb_003747_040 Hb_015026_120 Hb_015026_120 Hb_003747_040--Hb_015026_120 Hb_001274_030 Hb_001274_030 Hb_003747_040--Hb_001274_030 Hb_003777_270 Hb_003777_270 Hb_003747_040--Hb_003777_270 Hb_002890_280 Hb_002890_280 Hb_003747_040--Hb_002890_280 Hb_000243_280 Hb_000243_280 Hb_003747_040--Hb_000243_280 Hb_000510_090 Hb_000510_090 Hb_003747_040--Hb_000510_090 Hb_015026_120--Hb_003777_270 Hb_002762_060 Hb_002762_060 Hb_015026_120--Hb_002762_060 Hb_006447_010 Hb_006447_010 Hb_015026_120--Hb_006447_010 Hb_001248_050 Hb_001248_050 Hb_015026_120--Hb_001248_050 Hb_001840_080 Hb_001840_080 Hb_015026_120--Hb_001840_080 Hb_004109_200 Hb_004109_200 Hb_015026_120--Hb_004109_200 Hb_001913_010 Hb_001913_010 Hb_001274_030--Hb_001913_010 Hb_001823_100 Hb_001823_100 Hb_001274_030--Hb_001823_100 Hb_000162_090 Hb_000162_090 Hb_001274_030--Hb_000162_090 Hb_000803_150 Hb_000803_150 Hb_001274_030--Hb_000803_150 Hb_007951_050 Hb_007951_050 Hb_001274_030--Hb_007951_050 Hb_000787_110 Hb_000787_110 Hb_001274_030--Hb_000787_110 Hb_004223_090 Hb_004223_090 Hb_003777_270--Hb_004223_090 Hb_033642_010 Hb_033642_010 Hb_003777_270--Hb_033642_010 Hb_000099_240 Hb_000099_240 Hb_003777_270--Hb_000099_240 Hb_009111_050 Hb_009111_050 Hb_003777_270--Hb_009111_050 Hb_000032_570 Hb_000032_570 Hb_003777_270--Hb_000032_570 Hb_133271_020 Hb_133271_020 Hb_003777_270--Hb_133271_020 Hb_000975_290 Hb_000975_290 Hb_002890_280--Hb_000975_290 Hb_007672_010 Hb_007672_010 Hb_002890_280--Hb_007672_010 Hb_001157_030 Hb_001157_030 Hb_002890_280--Hb_001157_030 Hb_005062_070 Hb_005062_070 Hb_002890_280--Hb_005062_070 Hb_009382_020 Hb_009382_020 Hb_002890_280--Hb_009382_020 Hb_000754_060 Hb_000754_060 Hb_002890_280--Hb_000754_060 Hb_155375_010 Hb_155375_010 Hb_000243_280--Hb_155375_010 Hb_000243_280--Hb_000510_090 Hb_000347_340 Hb_000347_340 Hb_000243_280--Hb_000347_340 Hb_001976_050 Hb_001976_050 Hb_000243_280--Hb_001976_050 Hb_000094_020 Hb_000094_020 Hb_000243_280--Hb_000094_020 Hb_143813_010 Hb_143813_010 Hb_000510_090--Hb_143813_010 Hb_004724_100 Hb_004724_100 Hb_000510_090--Hb_004724_100 Hb_034585_030 Hb_034585_030 Hb_000510_090--Hb_034585_030 Hb_000510_090--Hb_155375_010 Hb_000510_090--Hb_003777_270 Hb_141131_010 Hb_141131_010 Hb_000510_090--Hb_141131_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
25.0604 7.22096 3.48439 3.83993 7.10305 28.9145
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
14.0036 23.2227 16.5031 8.25688 2.1604

CAGE analysis