Hb_003734_060

Information

Type -
Description -
Location Contig3734: 50069-54026
Sequence    

Annotation

kegg
ID vvi:100247040
description uncharacterized LOC100247040
nr
ID XP_012070661.1
description PREDICTED: uncharacterized protein LOC105632818 isoform X2 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KS37
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00704 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_38171: 51954-52209
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003734_060 0.0 - - PREDICTED: uncharacterized protein LOC105632818 isoform X2 [Jatropha curcas]
2 Hb_002168_060 0.1249934208 - - PREDICTED: inositol-pentakisphosphate 2-kinase-like isoform X1 [Jatropha curcas]
3 Hb_004619_080 0.1270095785 - - hypothetical protein PRUPE_ppa011369mg [Prunus persica]
4 Hb_028872_080 0.1287341513 - - PREDICTED: adenylate kinase 4-like [Jatropha curcas]
5 Hb_002871_190 0.1290075334 - - PREDICTED: uncharacterized protein LOC105628867 [Jatropha curcas]
6 Hb_002374_570 0.1310146034 - - PREDICTED: vesicle-associated protein 1-2-like [Jatropha curcas]
7 Hb_000025_210 0.1312884653 - - PREDICTED: hydroxymethylglutaryl-CoA lyase, mitochondrial [Jatropha curcas]
8 Hb_000174_030 0.1325504606 - - hypothetical protein RCOM_1077370 [Ricinus communis]
9 Hb_026889_030 0.1344531039 - - protein with unknown function [Ricinus communis]
10 Hb_003728_060 0.1400777364 transcription factor TF Family: FAR1 PREDICTED: protein FAR1-RELATED SEQUENCE 4-like [Jatropha curcas]
11 Hb_003057_090 0.142488809 - - ATP synthase D chain, mitochondrial, putative [Ricinus communis]
12 Hb_001604_060 0.144751246 - - PREDICTED: TPR repeat-containing thioredoxin TTL1 [Jatropha curcas]
13 Hb_001268_420 0.1449886963 - - PREDICTED: uncharacterized protein LOC105630158 [Jatropha curcas]
14 Hb_010583_020 0.1453855729 - - PREDICTED: uncharacterized protein LOC105646948 [Jatropha curcas]
15 Hb_002835_240 0.1467963578 - - hypothetical protein PRUPE_ppa013861mg [Prunus persica]
16 Hb_010361_010 0.1501074086 - - PREDICTED: ras-related protein RABH1b [Jatropha curcas]
17 Hb_003849_130 0.1503883072 - - PREDICTED: probable protein phosphatase 2C 14 [Jatropha curcas]
18 Hb_007811_040 0.1527275913 - - PREDICTED: trafficking protein particle complex subunit 4 isoform X1 [Gossypium raimondii]
19 Hb_020805_080 0.1534459645 - - PREDICTED: uncharacterized protein LOC105635198 [Jatropha curcas]
20 Hb_002540_080 0.1535657037 - - cysteine-type peptidase, putative [Ricinus communis]

Gene co-expression network

sample Hb_003734_060 Hb_003734_060 Hb_002168_060 Hb_002168_060 Hb_003734_060--Hb_002168_060 Hb_004619_080 Hb_004619_080 Hb_003734_060--Hb_004619_080 Hb_028872_080 Hb_028872_080 Hb_003734_060--Hb_028872_080 Hb_002871_190 Hb_002871_190 Hb_003734_060--Hb_002871_190 Hb_002374_570 Hb_002374_570 Hb_003734_060--Hb_002374_570 Hb_000025_210 Hb_000025_210 Hb_003734_060--Hb_000025_210 Hb_000465_090 Hb_000465_090 Hb_002168_060--Hb_000465_090 Hb_001012_010 Hb_001012_010 Hb_002168_060--Hb_001012_010 Hb_003057_090 Hb_003057_090 Hb_002168_060--Hb_003057_090 Hb_005054_060 Hb_005054_060 Hb_002168_060--Hb_005054_060 Hb_002477_300 Hb_002477_300 Hb_002168_060--Hb_002477_300 Hb_002168_060--Hb_004619_080 Hb_005847_060 Hb_005847_060 Hb_004619_080--Hb_005847_060 Hb_001348_180 Hb_001348_180 Hb_004619_080--Hb_001348_180 Hb_004619_080--Hb_005054_060 Hb_010583_020 Hb_010583_020 Hb_004619_080--Hb_010583_020 Hb_013726_020 Hb_013726_020 Hb_004619_080--Hb_013726_020 Hb_026889_030 Hb_026889_030 Hb_028872_080--Hb_026889_030 Hb_006831_120 Hb_006831_120 Hb_028872_080--Hb_006831_120 Hb_017225_020 Hb_017225_020 Hb_028872_080--Hb_017225_020 Hb_010361_010 Hb_010361_010 Hb_028872_080--Hb_010361_010 Hb_118419_010 Hb_118419_010 Hb_028872_080--Hb_118419_010 Hb_001604_060 Hb_001604_060 Hb_028872_080--Hb_001604_060 Hb_003728_060 Hb_003728_060 Hb_002871_190--Hb_003728_060 Hb_002871_190--Hb_026889_030 Hb_050514_010 Hb_050514_010 Hb_002871_190--Hb_050514_010 Hb_002871_190--Hb_010361_010 Hb_002600_090 Hb_002600_090 Hb_002871_190--Hb_002600_090 Hb_000827_050 Hb_000827_050 Hb_002871_190--Hb_000827_050 Hb_002016_170 Hb_002016_170 Hb_002374_570--Hb_002016_170 Hb_002374_570--Hb_118419_010 Hb_001124_090 Hb_001124_090 Hb_002374_570--Hb_001124_090 Hb_000457_180 Hb_000457_180 Hb_002374_570--Hb_000457_180 Hb_001318_250 Hb_001318_250 Hb_002374_570--Hb_001318_250 Hb_002374_570--Hb_003728_060 Hb_048476_110 Hb_048476_110 Hb_000025_210--Hb_048476_110 Hb_002183_070 Hb_002183_070 Hb_000025_210--Hb_002183_070 Hb_034482_020 Hb_034482_020 Hb_000025_210--Hb_034482_020 Hb_000059_360 Hb_000059_360 Hb_000025_210--Hb_000059_360 Hb_000046_100 Hb_000046_100 Hb_000025_210--Hb_000046_100
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.43032 0.235315 5.99115 3.01141 3.24618 2.64057
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
5.52217 3.97163 5.25441 1.32962 3.08766

CAGE analysis