Hb_002725_130

Information

Type -
Description -
Location Contig2725: 192485-195839
Sequence    

Annotation

kegg
ID rcu:RCOM_0915900
description Osmotic avoidance abnormal protein, putative
nr
ID XP_002532328.1
description Osmotic avoidance abnormal protein, putative [Ricinus communis]
swissprot
ID Q6P3R1
description Kinesin-like protein KIF22 OS=Xenopus tropicalis GN=kif22 PE=2 SV=1
trembl
ID B9T259
description Kinesin-like protein OS=Ricinus communis GN=RCOM_0915900 PE=3 SV=1
Gene Ontology
ID GO:0043229
description osmotic avoidance abnormal

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002725_130 0.0 - - Osmotic avoidance abnormal protein, putative [Ricinus communis]
2 Hb_005214_110 0.1779053761 - - -
3 Hb_005298_030 0.1816878266 - - hypothetical protein JCGZ_18389 [Jatropha curcas]
4 Hb_000733_030 0.1849504665 - - PREDICTED: 18.1 kDa class I heat shock protein-like [Populus euphratica]
5 Hb_030765_020 0.1931325036 - - ABC transporter family protein [Hevea brasiliensis]
6 Hb_000193_230 0.1937481397 - - PREDICTED: NEP1-interacting protein-like 2 isoform X1 [Jatropha curcas]
7 Hb_029879_080 0.1941802287 - - unknown [Populus trichocarpa]
8 Hb_000614_070 0.196586431 - - -
9 Hb_000143_050 0.196837174 - - PREDICTED: MFP1 attachment factor 1-like [Jatropha curcas]
10 Hb_025087_010 0.198643833 - - PREDICTED: RING-H2 finger protein ATL56 [Jatropha curcas]
11 Hb_001349_010 0.1988810351 - - -
12 Hb_002298_040 0.199387157 - - PREDICTED: uncharacterized protein LOC105633642 [Jatropha curcas]
13 Hb_000787_070 0.199865267 - - Early nodulin 55-2 precursor, putative [Ricinus communis]
14 Hb_073973_110 0.2016241305 - - PREDICTED: uncharacterized protein LOC105638912 [Jatropha curcas]
15 Hb_000304_020 0.2027557331 - - beta-1,3-glucanase form RRII Gln 3 [Hevea brasiliensis]
16 Hb_000831_060 0.2047345154 - - 17.5 kd heat shock family protein [Populus trichocarpa]
17 Hb_001153_200 0.2059791101 - - PREDICTED: calcium-dependent protein kinase 26 isoform X1 [Jatropha curcas]
18 Hb_001514_180 0.206658953 transcription factor TF Family: M-type hypothetical protein JCGZ_16067 [Jatropha curcas]
19 Hb_005016_130 0.2076997331 - - PREDICTED: uncharacterized protein LOC105642243 [Jatropha curcas]
20 Hb_024505_040 0.2077210469 - - homogentisate geranylgeranyl transferase [Hevea brasiliensis]

Gene co-expression network

sample Hb_002725_130 Hb_002725_130 Hb_005214_110 Hb_005214_110 Hb_002725_130--Hb_005214_110 Hb_005298_030 Hb_005298_030 Hb_002725_130--Hb_005298_030 Hb_000733_030 Hb_000733_030 Hb_002725_130--Hb_000733_030 Hb_030765_020 Hb_030765_020 Hb_002725_130--Hb_030765_020 Hb_000193_230 Hb_000193_230 Hb_002725_130--Hb_000193_230 Hb_029879_080 Hb_029879_080 Hb_002725_130--Hb_029879_080 Hb_007245_090 Hb_007245_090 Hb_005214_110--Hb_007245_090 Hb_001930_070 Hb_001930_070 Hb_005214_110--Hb_001930_070 Hb_001158_030 Hb_001158_030 Hb_005214_110--Hb_001158_030 Hb_000339_070 Hb_000339_070 Hb_005214_110--Hb_000339_070 Hb_000014_100 Hb_000014_100 Hb_005214_110--Hb_000014_100 Hb_001186_060 Hb_001186_060 Hb_005214_110--Hb_001186_060 Hb_002890_220 Hb_002890_220 Hb_005298_030--Hb_002890_220 Hb_000753_260 Hb_000753_260 Hb_005298_030--Hb_000753_260 Hb_002221_080 Hb_002221_080 Hb_005298_030--Hb_002221_080 Hb_002374_340 Hb_002374_340 Hb_005298_030--Hb_002374_340 Hb_000809_050 Hb_000809_050 Hb_005298_030--Hb_000809_050 Hb_030982_040 Hb_030982_040 Hb_005298_030--Hb_030982_040 Hb_001349_010 Hb_001349_010 Hb_000733_030--Hb_001349_010 Hb_004650_070 Hb_004650_070 Hb_000733_030--Hb_004650_070 Hb_025087_010 Hb_025087_010 Hb_000733_030--Hb_025087_010 Hb_005000_290 Hb_005000_290 Hb_000733_030--Hb_005000_290 Hb_000733_030--Hb_000809_050 Hb_002897_060 Hb_002897_060 Hb_000733_030--Hb_002897_060 Hb_000143_050 Hb_000143_050 Hb_030765_020--Hb_000143_050 Hb_012799_060 Hb_012799_060 Hb_030765_020--Hb_012799_060 Hb_000078_030 Hb_000078_030 Hb_030765_020--Hb_000078_030 Hb_060668_010 Hb_060668_010 Hb_030765_020--Hb_060668_010 Hb_001741_080 Hb_001741_080 Hb_030765_020--Hb_001741_080 Hb_000580_170 Hb_000580_170 Hb_030765_020--Hb_000580_170 Hb_000193_230--Hb_000078_030 Hb_002298_040 Hb_002298_040 Hb_000193_230--Hb_002298_040 Hb_006787_040 Hb_006787_040 Hb_000193_230--Hb_006787_040 Hb_115919_020 Hb_115919_020 Hb_000193_230--Hb_115919_020 Hb_012305_060 Hb_012305_060 Hb_000193_230--Hb_012305_060 Hb_000284_010 Hb_000284_010 Hb_000193_230--Hb_000284_010 Hb_010578_090 Hb_010578_090 Hb_029879_080--Hb_010578_090 Hb_029879_080--Hb_002298_040 Hb_005016_130 Hb_005016_130 Hb_029879_080--Hb_005016_130 Hb_029879_080--Hb_115919_020 Hb_029879_080--Hb_000284_010 Hb_029879_080--Hb_002221_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0329434 0.014625 0 0 0.0588436 0.0446061
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.10039 0.0526515 0.0493432 0 0

CAGE analysis