Hb_002333_030

Information

Type -
Description -
Location Contig2333: 63477-63954
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002333_030 0.0 - - -
2 Hb_002019_010 0.2040165889 - - -
3 Hb_037605_010 0.2474126898 - - PREDICTED: uncharacterized protein LOC105641027 [Jatropha curcas]
4 Hb_000724_030 0.329422726 - - PREDICTED: uncharacterized protein LOC105645165 [Jatropha curcas]
5 Hb_000589_430 0.3379870917 - - hypothetical protein JCGZ_01402 [Jatropha curcas]
6 Hb_000483_170 0.3380136889 transcription factor TF Family: NAC PREDICTED: protein FEZ [Jatropha curcas]
7 Hb_001792_010 0.3390112162 - - Uncharacterized protein TCM_043787 [Theobroma cacao]
8 Hb_002641_150 0.3390686254 - - PREDICTED: stachyose synthase-like [Citrus sinensis]
9 Hb_001998_040 0.3391520495 - - ATP binding protein, putative [Ricinus communis]
10 Hb_002260_230 0.3391930389 - - hypothetical protein SORBIDRAFT_05g006180 [Sorghum bicolor]
11 Hb_001274_010 0.3392291993 - - -
12 Hb_000463_110 0.3399236803 - - -
13 Hb_002686_370 0.33994701 - - PREDICTED: uncharacterized protein LOC102628436 [Citrus sinensis]
14 Hb_092416_010 0.3399972124 - - PREDICTED: uncharacterized protein LOC105638802 [Jatropha curcas]
15 Hb_157349_010 0.3400587192 - - PREDICTED: uncharacterized protein LOC102588546 [Solanum tuberosum]
16 Hb_142295_010 0.3406664153 - - -
17 Hb_165085_010 0.3411113281 - - hypothetical protein JCGZ_19461 [Jatropha curcas]
18 Hb_007586_020 0.3433347717 - - hypothetical protein PRUPE_ppa022673mg [Prunus persica]
19 Hb_004888_050 0.3436050354 - - hypothetical protein PRUPE_ppa015000mg [Prunus persica]
20 Hb_003929_060 0.3458352225 - - PREDICTED: uncharacterized protein ECU03_1610 [Jatropha curcas]

Gene co-expression network

sample Hb_002333_030 Hb_002333_030 Hb_002019_010 Hb_002019_010 Hb_002333_030--Hb_002019_010 Hb_037605_010 Hb_037605_010 Hb_002333_030--Hb_037605_010 Hb_000724_030 Hb_000724_030 Hb_002333_030--Hb_000724_030 Hb_000589_430 Hb_000589_430 Hb_002333_030--Hb_000589_430 Hb_000483_170 Hb_000483_170 Hb_002333_030--Hb_000483_170 Hb_001792_010 Hb_001792_010 Hb_002333_030--Hb_001792_010 Hb_001313_010 Hb_001313_010 Hb_002019_010--Hb_001313_010 Hb_000089_150 Hb_000089_150 Hb_002019_010--Hb_000089_150 Hb_007467_020 Hb_007467_020 Hb_002019_010--Hb_007467_020 Hb_002019_010--Hb_000724_030 Hb_092855_030 Hb_092855_030 Hb_002019_010--Hb_092855_030 Hb_000195_050 Hb_000195_050 Hb_037605_010--Hb_000195_050 Hb_000563_290 Hb_000563_290 Hb_037605_010--Hb_000563_290 Hb_038675_010 Hb_038675_010 Hb_037605_010--Hb_038675_010 Hb_059069_010 Hb_059069_010 Hb_037605_010--Hb_059069_010 Hb_011360_100 Hb_011360_100 Hb_037605_010--Hb_011360_100 Hb_002490_040 Hb_002490_040 Hb_037605_010--Hb_002490_040 Hb_084858_010 Hb_084858_010 Hb_000724_030--Hb_084858_010 Hb_001014_130 Hb_001014_130 Hb_000724_030--Hb_001014_130 Hb_000544_100 Hb_000544_100 Hb_000724_030--Hb_000544_100 Hb_004648_010 Hb_004648_010 Hb_000724_030--Hb_004648_010 Hb_002299_050 Hb_002299_050 Hb_000724_030--Hb_002299_050 Hb_004724_120 Hb_004724_120 Hb_000724_030--Hb_004724_120 Hb_000589_430--Hb_000483_170 Hb_000589_430--Hb_001792_010 Hb_002641_150 Hb_002641_150 Hb_000589_430--Hb_002641_150 Hb_001998_040 Hb_001998_040 Hb_000589_430--Hb_001998_040 Hb_002260_230 Hb_002260_230 Hb_000589_430--Hb_002260_230 Hb_000463_110 Hb_000463_110 Hb_000589_430--Hb_000463_110 Hb_001274_010 Hb_001274_010 Hb_000483_170--Hb_001274_010 Hb_157349_010 Hb_157349_010 Hb_000483_170--Hb_157349_010 Hb_000483_170--Hb_001792_010 Hb_000483_170--Hb_002641_150 Hb_000483_170--Hb_001998_040 Hb_001792_010--Hb_002641_150 Hb_001792_010--Hb_001998_040 Hb_001792_010--Hb_002260_230 Hb_001792_010--Hb_000463_110 Hb_002686_370 Hb_002686_370 Hb_001792_010--Hb_002686_370 Hb_092416_010 Hb_092416_010 Hb_001792_010--Hb_092416_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.067155 0 0 0 0 0.147551
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.104299 0

CAGE analysis