Hb_000849_130

Information

Type -
Description -
Location Contig849: 146126-146620
Sequence    

Annotation

kegg
ID pop:POPTR_0002s24010g
description POPTRDRAFT_553127; hypothetical protein
nr
ID XP_010249447.1
description PREDICTED: adrenodoxin-like protein, mitochondrial [Nelumbo nucifera]
swissprot
ID Q9CPW2
description Adrenodoxin-like protein, mitochondrial OS=Mus musculus GN=Fdx1l PE=2 SV=1
trembl
ID A0A067L9X6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15101 PE=4 SV=1
Gene Ontology
ID GO:0009055
description adrenodoxin-like mitochondrial

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000849_130 0.0 - - PREDICTED: adrenodoxin-like protein, mitochondrial [Nelumbo nucifera]
2 Hb_000009_290 0.0720456962 - - PREDICTED: cold-regulated 413 plasma membrane protein 4-like [Jatropha curcas]
3 Hb_154948_040 0.0773402058 - - hypothetical protein B456_013G043800 [Gossypium raimondii]
4 Hb_002105_100 0.0842511574 - - protein with unknown function [Ricinus communis]
5 Hb_045003_010 0.0853120754 - - Stomatin-1, putative [Ricinus communis]
6 Hb_002303_060 0.0888137295 - - conserved hypothetical protein [Ricinus communis]
7 Hb_000783_010 0.0899702696 - - PREDICTED: ras-related protein RABF1 [Jatropha curcas]
8 Hb_006326_040 0.0904526056 - - conserved hypothetical protein [Ricinus communis]
9 Hb_000608_050 0.0914826356 - - PREDICTED: GDT1-like protein 4 [Jatropha curcas]
10 Hb_002042_150 0.0917869874 - - PREDICTED: signal peptidase complex subunit 3B [Jatropha curcas]
11 Hb_000803_200 0.0923489102 - - ubiquitin-conjugating enzyme E2 C, putative [Ricinus communis]
12 Hb_000808_190 0.094474777 - - PREDICTED: GTP-binding protein SAR1A-like [Eucalyptus grandis]
13 Hb_002681_200 0.0953217744 - - PREDICTED: E3 ubiquitin-protein ligase RGLG2 [Jatropha curcas]
14 Hb_002301_160 0.0954549228 - - PREDICTED: pentatricopeptide repeat-containing protein At5g04780-like [Jatropha curcas]
15 Hb_000392_340 0.0966673955 - - PREDICTED: vacuolar protein sorting-associated protein 29 [Jatropha curcas]
16 Hb_000002_380 0.0971663233 - - PREDICTED: bet1-like SNARE 1-2 [Jatropha curcas]
17 Hb_001353_010 0.0971917156 - - PREDICTED: cytochrome c oxidase assembly protein COX11, mitochondrial [Jatropha curcas]
18 Hb_006573_020 0.0974926651 - - PREDICTED: 40S ribosomal protein S10-like [Jatropha curcas]
19 Hb_001057_040 0.0982812921 - - PREDICTED: oligosaccharyltransferase complex subunit ostc [Jatropha curcas]
20 Hb_000805_240 0.0994629312 - - PREDICTED: uncharacterized protein C20orf24 homolog [Jatropha curcas]

Gene co-expression network

sample Hb_000849_130 Hb_000849_130 Hb_000009_290 Hb_000009_290 Hb_000849_130--Hb_000009_290 Hb_154948_040 Hb_154948_040 Hb_000849_130--Hb_154948_040 Hb_002105_100 Hb_002105_100 Hb_000849_130--Hb_002105_100 Hb_045003_010 Hb_045003_010 Hb_000849_130--Hb_045003_010 Hb_002303_060 Hb_002303_060 Hb_000849_130--Hb_002303_060 Hb_000783_010 Hb_000783_010 Hb_000849_130--Hb_000783_010 Hb_002301_160 Hb_002301_160 Hb_000009_290--Hb_002301_160 Hb_000327_380 Hb_000327_380 Hb_000009_290--Hb_000327_380 Hb_000009_290--Hb_002303_060 Hb_002045_070 Hb_002045_070 Hb_000009_290--Hb_002045_070 Hb_001410_060 Hb_001410_060 Hb_000009_290--Hb_001410_060 Hb_000002_380 Hb_000002_380 Hb_154948_040--Hb_000002_380 Hb_017895_040 Hb_017895_040 Hb_154948_040--Hb_017895_040 Hb_000390_300 Hb_000390_300 Hb_154948_040--Hb_000390_300 Hb_154948_040--Hb_002105_100 Hb_154948_040--Hb_045003_010 Hb_007878_010 Hb_007878_010 Hb_154948_040--Hb_007878_010 Hb_002105_100--Hb_000002_380 Hb_000005_090 Hb_000005_090 Hb_002105_100--Hb_000005_090 Hb_000805_240 Hb_000805_240 Hb_002105_100--Hb_000805_240 Hb_002105_100--Hb_000390_300 Hb_002171_060 Hb_002171_060 Hb_002105_100--Hb_002171_060 Hb_002042_150 Hb_002042_150 Hb_045003_010--Hb_002042_150 Hb_001353_010 Hb_001353_010 Hb_045003_010--Hb_001353_010 Hb_000566_120 Hb_000566_120 Hb_045003_010--Hb_000566_120 Hb_006326_040 Hb_006326_040 Hb_045003_010--Hb_006326_040 Hb_002995_050 Hb_002995_050 Hb_045003_010--Hb_002995_050 Hb_005269_080 Hb_005269_080 Hb_002303_060--Hb_005269_080 Hb_001053_140 Hb_001053_140 Hb_002303_060--Hb_001053_140 Hb_000189_240 Hb_000189_240 Hb_002303_060--Hb_000189_240 Hb_002314_010 Hb_002314_010 Hb_002303_060--Hb_002314_010 Hb_003605_160 Hb_003605_160 Hb_002303_060--Hb_003605_160 Hb_000107_300 Hb_000107_300 Hb_002303_060--Hb_000107_300 Hb_000510_300 Hb_000510_300 Hb_000783_010--Hb_000510_300 Hb_000200_020 Hb_000200_020 Hb_000783_010--Hb_000200_020 Hb_001366_370 Hb_001366_370 Hb_000783_010--Hb_001366_370 Hb_000720_040 Hb_000720_040 Hb_000783_010--Hb_000720_040 Hb_011628_060 Hb_011628_060 Hb_000783_010--Hb_011628_060 Hb_000331_180 Hb_000331_180 Hb_000783_010--Hb_000331_180
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
20.3805 18.1948 32.3913 70.4324 14.7466 30.9017
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
45.0297 69.0352 39.1448 33.3208 17.1957

CAGE analysis