Hb_000802_040

Information

Type -
Description -
Location Contig802: 39862-44061
Sequence    

Annotation

kegg
ID cit:102620399
description probable inositol transporter 2-like
nr
ID XP_012072144.1
description PREDICTED: probable inositol transporter 2 [Jatropha curcas]
swissprot
ID Q9C757
description Probable inositol transporter 2 OS=Arabidopsis thaliana GN=INT2 PE=1 SV=1
trembl
ID A0A067KP43
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04644 PE=3 SV=1
Gene Ontology
ID GO:0016021
description probable inositol transporter 2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_58821: 40758-42731 , PASA_asmbl_58822: 43139-43353
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000802_040 0.0 - - PREDICTED: probable inositol transporter 2 [Jatropha curcas]
2 Hb_010327_040 0.0413417211 - - hypothetical protein POPTR_0004s17300g [Populus trichocarpa]
3 Hb_124677_070 0.0556301592 - - PREDICTED: DNA-damage-repair/toleration protein DRT100-like [Jatropha curcas]
4 Hb_026196_020 0.0582160224 - - transferase, transferring glycosyl groups, putative [Ricinus communis]
5 Hb_001416_120 0.0696520802 - - caspase, putative [Ricinus communis]
6 Hb_002999_020 0.0699069733 - - PREDICTED: ribonuclease 3-like [Jatropha curcas]
7 Hb_004693_040 0.0699483219 - - -
8 Hb_000742_040 0.0737531442 - - PREDICTED: caffeoylshikimate esterase-like [Jatropha curcas]
9 Hb_024066_020 0.0798621221 - - P66 protein [Hevea brasiliensis]
10 Hb_004396_020 0.0852944454 - - SAUR-like auxin-responsive protein family [Theobroma cacao]
11 Hb_188742_010 0.0853546093 - - hypothetical protein POPTR_0019s12290g [Populus trichocarpa]
12 Hb_153258_030 0.0859307289 - - hypothetical protein RCOM_0853150 [Ricinus communis]
13 Hb_000796_110 0.090230811 - - PREDICTED: probable pectinesterase 53 [Populus euphratica]
14 Hb_007007_140 0.0909991982 transcription factor TF Family: MIKC PREDICTED: agamous-like MADS-box protein AGL6 [Jatropha curcas]
15 Hb_018910_010 0.0923501848 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g36180-like isoform X3 [Citrus sinensis]
16 Hb_002308_040 0.0959579411 - - methyladenine glycosylase family protein [Populus trichocarpa]
17 Hb_004732_080 0.0994590098 - - PREDICTED: germin-like protein subfamily 3 member 2 [Populus euphratica]
18 Hb_016734_110 0.1003693104 transcription factor TF Family: MYB-related hypothetical protein POPTR_0005s12390g [Populus trichocarpa]
19 Hb_002471_310 0.1019276836 - - PREDICTED: vacuolar iron transporter 1-like isoform X1 [Jatropha curcas]
20 Hb_000392_080 0.1028627734 - - hypothetical protein glysoja_034865 [Glycine soja]

Gene co-expression network

sample Hb_000802_040 Hb_000802_040 Hb_010327_040 Hb_010327_040 Hb_000802_040--Hb_010327_040 Hb_124677_070 Hb_124677_070 Hb_000802_040--Hb_124677_070 Hb_026196_020 Hb_026196_020 Hb_000802_040--Hb_026196_020 Hb_001416_120 Hb_001416_120 Hb_000802_040--Hb_001416_120 Hb_002999_020 Hb_002999_020 Hb_000802_040--Hb_002999_020 Hb_004693_040 Hb_004693_040 Hb_000802_040--Hb_004693_040 Hb_004396_020 Hb_004396_020 Hb_010327_040--Hb_004396_020 Hb_024066_020 Hb_024066_020 Hb_010327_040--Hb_024066_020 Hb_007007_140 Hb_007007_140 Hb_010327_040--Hb_007007_140 Hb_010327_040--Hb_004693_040 Hb_000392_080 Hb_000392_080 Hb_010327_040--Hb_000392_080 Hb_000742_040 Hb_000742_040 Hb_124677_070--Hb_000742_040 Hb_124677_070--Hb_026196_020 Hb_188742_010 Hb_188742_010 Hb_124677_070--Hb_188742_010 Hb_124677_070--Hb_002999_020 Hb_124677_070--Hb_010327_040 Hb_026196_020--Hb_188742_010 Hb_026196_020--Hb_010327_040 Hb_026196_020--Hb_000742_040 Hb_000896_030 Hb_000896_030 Hb_026196_020--Hb_000896_030 Hb_000796_110 Hb_000796_110 Hb_001416_120--Hb_000796_110 Hb_153258_030 Hb_153258_030 Hb_001416_120--Hb_153258_030 Hb_001416_120--Hb_002999_020 Hb_001416_120--Hb_000742_040 Hb_001416_120--Hb_124677_070 Hb_002999_020--Hb_153258_030 Hb_002999_020--Hb_000742_040 Hb_002999_020--Hb_000796_110 Hb_016734_110 Hb_016734_110 Hb_002999_020--Hb_016734_110 Hb_018910_010 Hb_018910_010 Hb_004693_040--Hb_018910_010 Hb_002308_040 Hb_002308_040 Hb_004693_040--Hb_002308_040 Hb_002471_310 Hb_002471_310 Hb_004693_040--Hb_002471_310 Hb_005665_100 Hb_005665_100 Hb_004693_040--Hb_005665_100 Hb_004693_040--Hb_024066_020 Hb_000049_190 Hb_000049_190 Hb_004693_040--Hb_000049_190
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 5.75524 25.1858 0 0.0175214
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0164108 0 0.00652467 1.35532

CAGE analysis