Hb_000571_130

Information

Type -
Description -
Location Contig571: 147319-149352
Sequence    

Annotation

kegg
ID rcu:RCOM_0847450
description kinase, putative (EC:2.7.11.22)
nr
ID XP_002526657.1
description kinase, putative [Ricinus communis]
swissprot
ID Q9M020
description Lectin-domain containing receptor kinase VI.3 OS=Arabidopsis thaliana GN=LECRK63 PE=2 SV=1
trembl
ID B9SKY8
description Kinase, putative OS=Ricinus communis GN=RCOM_0847450 PE=3 SV=1
Gene Ontology
ID GO:0004672
description lectin-domain containing receptor kinase -like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000571_130 0.0 - - kinase, putative [Ricinus communis]
2 Hb_016529_010 0.1165325041 - - polyprotein [Oryza australiensis]
3 Hb_000175_650 0.1385939428 - - PREDICTED: cyclin-A2-2-like [Jatropha curcas]
4 Hb_000733_250 0.1905837918 - - serine/threonine protein phosphatase PP1 isozyme 1 [Loa loa]
5 Hb_000039_140 0.2034627293 - - nuclease, putative [Ricinus communis]
6 Hb_007317_040 0.2036398978 transcription factor TF Family: bZIP PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 7 [Jatropha curcas]
7 Hb_000185_110 0.2040889528 - - hypothetical protein JCGZ_11437 [Jatropha curcas]
8 Hb_118410_020 0.2042563603 - - PREDICTED: UDP-glycosyltransferase 76C4 [Vitis vinifera]
9 Hb_029552_010 0.2043274227 - - hypothetical protein JCGZ_08684 [Jatropha curcas]
10 Hb_034168_020 0.2047648278 - - putative uncharacterized protein (mitochondrion) [Hevea brasiliensis]
11 Hb_003685_020 0.2051209922 - - PREDICTED: laccase-14-like [Fragaria vesca subsp. vesca]
12 Hb_019449_010 0.2056639305 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
13 Hb_000192_100 0.2057275595 - - hypothetical protein CICLE_v10033628mg, partial [Citrus clementina]
14 Hb_001281_030 0.2063697344 - - hypothetical protein POPTR_0010s18450g [Populus trichocarpa]
15 Hb_000337_020 0.2066884726 transcription factor TF Family: MYB PREDICTED: myb-related protein 308 isoform X2 [Jatropha curcas]
16 Hb_054127_030 0.2067038703 - - PREDICTED: putative L-type lectin-domain containing receptor kinase II.2 [Jatropha curcas]
17 Hb_081843_010 0.2069003929 - - PREDICTED: uncharacterized protein LOC104880938 [Vitis vinifera]
18 Hb_009026_010 0.2075514258 - - Squalene monooxygenase, putative [Ricinus communis]
19 Hb_052135_050 0.2076840302 - - PREDICTED: probable pectinesterase 67 [Jatropha curcas]
20 Hb_000313_160 0.2078908714 - - BnaC02g20570D [Brassica napus]

Gene co-expression network

sample Hb_000571_130 Hb_000571_130 Hb_016529_010 Hb_016529_010 Hb_000571_130--Hb_016529_010 Hb_000175_650 Hb_000175_650 Hb_000571_130--Hb_000175_650 Hb_000733_250 Hb_000733_250 Hb_000571_130--Hb_000733_250 Hb_000039_140 Hb_000039_140 Hb_000571_130--Hb_000039_140 Hb_007317_040 Hb_007317_040 Hb_000571_130--Hb_007317_040 Hb_000185_110 Hb_000185_110 Hb_000571_130--Hb_000185_110 Hb_016529_010--Hb_000733_250 Hb_002320_030 Hb_002320_030 Hb_016529_010--Hb_002320_030 Hb_016529_010--Hb_000175_650 Hb_000834_110 Hb_000834_110 Hb_016529_010--Hb_000834_110 Hb_000636_010 Hb_000636_010 Hb_016529_010--Hb_000636_010 Hb_000175_650--Hb_000834_110 Hb_020287_010 Hb_020287_010 Hb_000175_650--Hb_020287_010 Hb_002471_010 Hb_002471_010 Hb_000175_650--Hb_002471_010 Hb_000877_010 Hb_000877_010 Hb_000175_650--Hb_000877_010 Hb_000733_250--Hb_002320_030 Hb_161017_020 Hb_161017_020 Hb_000733_250--Hb_161017_020 Hb_000733_250--Hb_000175_650 Hb_000733_250--Hb_000636_010 Hb_000039_140--Hb_007317_040 Hb_000039_140--Hb_000185_110 Hb_029552_010 Hb_029552_010 Hb_000039_140--Hb_029552_010 Hb_118410_020 Hb_118410_020 Hb_000039_140--Hb_118410_020 Hb_019449_010 Hb_019449_010 Hb_000039_140--Hb_019449_010 Hb_000192_100 Hb_000192_100 Hb_000039_140--Hb_000192_100 Hb_007317_040--Hb_000185_110 Hb_007317_040--Hb_029552_010 Hb_007317_040--Hb_019449_010 Hb_007317_040--Hb_000192_100 Hb_054127_030 Hb_054127_030 Hb_007317_040--Hb_054127_030 Hb_000185_110--Hb_029552_010 Hb_000185_110--Hb_019449_010 Hb_000185_110--Hb_000192_100 Hb_000185_110--Hb_054127_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.0392024 0 0.0100384 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0.0757509

CAGE analysis