Hb_000329_170

Information

Type -
Description -
Location Contig329: 95952-98732
Sequence    

Annotation

kegg
ID rcu:RCOM_1611010
description kinase, putative
nr
ID XP_012083610.1
description PREDICTED: cysteine-rich repeat secretory protein 15 [Jatropha curcas]
swissprot
ID Q6NKQ9
description Cysteine-rich repeat secretory protein 15 OS=Arabidopsis thaliana GN=CRRSP15 PE=1 SV=1
trembl
ID A0A067JXV4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14552 PE=4 SV=1
Gene Ontology
ID GO:0016301
description cysteine-rich repeat secretory protein 15-like isoform x2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_34504: 96637-98042
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000329_170 0.0 - - PREDICTED: cysteine-rich repeat secretory protein 15 [Jatropha curcas]
2 Hb_000375_150 0.0921230112 - - conserved hypothetical protein [Ricinus communis]
3 Hb_001518_030 0.1044577443 - - Receptor protein kinase CLAVATA1 precursor, putative [Ricinus communis]
4 Hb_002725_080 0.1123476559 - - protein phosphatase 2c, putative [Ricinus communis]
5 Hb_005618_010 0.1162270302 transcription factor TF Family: MYB hypothetical protein POPTR_0014s10680g [Populus trichocarpa]
6 Hb_026048_030 0.1288067605 - - conserved hypothetical protein [Ricinus communis]
7 Hb_024650_010 0.1291980089 - - PREDICTED: BAHD acyltransferase DCR [Jatropha curcas]
8 Hb_113396_010 0.1393317283 - - cytochrome P450, putative [Ricinus communis]
9 Hb_000008_170 0.1421758168 - - PREDICTED: uncharacterized protein LOC105628076 [Jatropha curcas]
10 Hb_005694_150 0.1422990767 - - PREDICTED: probable mitochondrial chaperone BCS1-A [Jatropha curcas]
11 Hb_006002_020 0.1427519678 - - PREDICTED: cytokinin dehydrogenase 7 [Jatropha curcas]
12 Hb_004724_300 0.1432707151 transcription factor TF Family: NAC PREDICTED: NAC domain-containing protein 90-like [Jatropha curcas]
13 Hb_000365_190 0.1433337625 - - PREDICTED: protein LURP-one-related 8 [Jatropha curcas]
14 Hb_007292_050 0.1444724866 desease resistance Gene Name: NB-ARC PREDICTED: disease resistance RPP13-like protein 4 [Jatropha curcas]
15 Hb_001310_080 0.1445212602 transcription factor TF Family: C2H2 PREDICTED: zinc finger protein AZF2-like [Jatropha curcas]
16 Hb_000172_070 0.1445812888 - - trehalose-6-phosphate synthase, putative [Ricinus communis]
17 Hb_010417_110 0.1453738433 - - conserved hypothetical protein [Ricinus communis]
18 Hb_013691_060 0.1470907225 - - PREDICTED: uncharacterized protein LOC105119066 [Populus euphratica]
19 Hb_002218_080 0.147879486 - - Ankyrin repeat family protein, putative [Theobroma cacao]
20 Hb_000181_390 0.1491461199 - - unknown [Lotus japonicus]

Gene co-expression network

sample Hb_000329_170 Hb_000329_170 Hb_000375_150 Hb_000375_150 Hb_000329_170--Hb_000375_150 Hb_001518_030 Hb_001518_030 Hb_000329_170--Hb_001518_030 Hb_002725_080 Hb_002725_080 Hb_000329_170--Hb_002725_080 Hb_005618_010 Hb_005618_010 Hb_000329_170--Hb_005618_010 Hb_026048_030 Hb_026048_030 Hb_000329_170--Hb_026048_030 Hb_024650_010 Hb_024650_010 Hb_000329_170--Hb_024650_010 Hb_005694_150 Hb_005694_150 Hb_000375_150--Hb_005694_150 Hb_000325_070 Hb_000325_070 Hb_000375_150--Hb_000325_070 Hb_000375_150--Hb_002725_080 Hb_000181_390 Hb_000181_390 Hb_000375_150--Hb_000181_390 Hb_050847_030 Hb_050847_030 Hb_000375_150--Hb_050847_030 Hb_001518_030--Hb_026048_030 Hb_001518_030--Hb_024650_010 Hb_000028_330 Hb_000028_330 Hb_001518_030--Hb_000028_330 Hb_003435_040 Hb_003435_040 Hb_001518_030--Hb_003435_040 Hb_001310_080 Hb_001310_080 Hb_001518_030--Hb_001310_080 Hb_006736_040 Hb_006736_040 Hb_001518_030--Hb_006736_040 Hb_004724_300 Hb_004724_300 Hb_002725_080--Hb_004724_300 Hb_002725_080--Hb_024650_010 Hb_010417_110 Hb_010417_110 Hb_002725_080--Hb_010417_110 Hb_000574_230 Hb_000574_230 Hb_002725_080--Hb_000574_230 Hb_009557_080 Hb_009557_080 Hb_002725_080--Hb_009557_080 Hb_006002_020 Hb_006002_020 Hb_002725_080--Hb_006002_020 Hb_000172_070 Hb_000172_070 Hb_005618_010--Hb_000172_070 Hb_007292_050 Hb_007292_050 Hb_005618_010--Hb_007292_050 Hb_010267_030 Hb_010267_030 Hb_005618_010--Hb_010267_030 Hb_005618_010--Hb_000181_390 Hb_112145_010 Hb_112145_010 Hb_005618_010--Hb_112145_010 Hb_005618_010--Hb_002725_080 Hb_026048_030--Hb_001310_080 Hb_113396_010 Hb_113396_010 Hb_026048_030--Hb_113396_010 Hb_026048_030--Hb_000028_330 Hb_026048_030--Hb_024650_010 Hb_000365_190 Hb_000365_190 Hb_026048_030--Hb_000365_190 Hb_024650_010--Hb_006736_040 Hb_024650_010--Hb_003435_040 Hb_024650_010--Hb_000028_330
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 1.43405 0.625126 1.29923 0 0.0817177
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.050453 0.511411

CAGE analysis