Hb_001310_080

Information

Type transcription factor
Description TF Family: C2H2
Location Contig1310: 112429-113344
Sequence    

Annotation

kegg
ID pxb:103938799
description zinc finger protein ZAT10-like
nr
ID XP_012079586.1
description PREDICTED: zinc finger protein AZF2-like [Jatropha curcas]
swissprot
ID Q96289
description Zinc finger protein ZAT10 OS=Arabidopsis thaliana GN=ZAT10 PE=2 SV=1
trembl
ID A0A067KAM0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12524 PE=4 SV=1
Gene Ontology
ID GO:0046872
description zinc finger protein zat10-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001310_080 0.0 transcription factor TF Family: C2H2 PREDICTED: zinc finger protein AZF2-like [Jatropha curcas]
2 Hb_113396_010 0.0474272396 - - cytochrome P450, putative [Ricinus communis]
3 Hb_002218_080 0.0659155911 - - Ankyrin repeat family protein, putative [Theobroma cacao]
4 Hb_026048_030 0.0675242807 - - conserved hypothetical protein [Ricinus communis]
5 Hb_004112_050 0.0834889188 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance protein RGA3 [Jatropha curcas]
6 Hb_000024_020 0.0919747937 - - PREDICTED: uncharacterized protein LOC105636896 [Jatropha curcas]
7 Hb_001518_030 0.0920381457 - - Receptor protein kinase CLAVATA1 precursor, putative [Ricinus communis]
8 Hb_006573_280 0.1009169782 - - PREDICTED: probable membrane-associated kinase regulator 5 [Jatropha curcas]
9 Hb_000836_220 0.10443653 - - UDP-glucosyltransferase, putative [Ricinus communis]
10 Hb_000365_190 0.1056210455 - - PREDICTED: protein LURP-one-related 8 [Jatropha curcas]
11 Hb_024650_010 0.1086708736 - - PREDICTED: BAHD acyltransferase DCR [Jatropha curcas]
12 Hb_008948_110 0.1087367671 - - PREDICTED: peroxidase 25 [Jatropha curcas]
13 Hb_000028_330 0.1121437869 - - PREDICTED: mitogen-activated protein kinase kinase 9-like [Pyrus x bretschneideri]
14 Hb_001104_270 0.1143588439 - - hypothetical protein POPTR_0007s13980g [Populus trichocarpa]
15 Hb_096930_010 0.1177521236 - - hypothetical protein JCGZ_27059 [Jatropha curcas]
16 Hb_002110_050 0.1214002385 - - conserved hypothetical protein [Ricinus communis]
17 Hb_002725_080 0.1215062982 - - protein phosphatase 2c, putative [Ricinus communis]
18 Hb_000567_110 0.124070465 - - hypothetical protein JCGZ_21556 [Jatropha curcas]
19 Hb_004724_300 0.1244778954 transcription factor TF Family: NAC PREDICTED: NAC domain-containing protein 90-like [Jatropha curcas]
20 Hb_001198_160 0.1283657485 - - anthocyanidin 3-O-glucosyltransferase [Hevea brasiliensis]

Gene co-expression network

sample Hb_001310_080 Hb_001310_080 Hb_113396_010 Hb_113396_010 Hb_001310_080--Hb_113396_010 Hb_002218_080 Hb_002218_080 Hb_001310_080--Hb_002218_080 Hb_026048_030 Hb_026048_030 Hb_001310_080--Hb_026048_030 Hb_004112_050 Hb_004112_050 Hb_001310_080--Hb_004112_050 Hb_000024_020 Hb_000024_020 Hb_001310_080--Hb_000024_020 Hb_001518_030 Hb_001518_030 Hb_001310_080--Hb_001518_030 Hb_113396_010--Hb_002218_080 Hb_113396_010--Hb_026048_030 Hb_000365_190 Hb_000365_190 Hb_113396_010--Hb_000365_190 Hb_113396_010--Hb_000024_020 Hb_113396_010--Hb_004112_050 Hb_002110_050 Hb_002110_050 Hb_002218_080--Hb_002110_050 Hb_002548_020 Hb_002548_020 Hb_002218_080--Hb_002548_020 Hb_002218_080--Hb_000024_020 Hb_002218_080--Hb_004112_050 Hb_026048_030--Hb_001518_030 Hb_000028_330 Hb_000028_330 Hb_026048_030--Hb_000028_330 Hb_024650_010 Hb_024650_010 Hb_026048_030--Hb_024650_010 Hb_026048_030--Hb_000365_190 Hb_004724_300 Hb_004724_300 Hb_004112_050--Hb_004724_300 Hb_007102_010 Hb_007102_010 Hb_004112_050--Hb_007102_010 Hb_007007_030 Hb_007007_030 Hb_004112_050--Hb_007007_030 Hb_007441_150 Hb_007441_150 Hb_000024_020--Hb_007441_150 Hb_000567_110 Hb_000567_110 Hb_000024_020--Hb_000567_110 Hb_000024_020--Hb_004112_050 Hb_001518_030--Hb_024650_010 Hb_001518_030--Hb_000028_330 Hb_003435_040 Hb_003435_040 Hb_001518_030--Hb_003435_040 Hb_006736_040 Hb_006736_040 Hb_001518_030--Hb_006736_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 16.8164 6.72432 10.8531 0.0526294 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.993562 3.06578

CAGE analysis