Hb_000211_030

Information

Type -
Description -
Location Contig211: 49913-57029
Sequence    

Annotation

kegg
ID rcu:RCOM_0573930
description sugar transporter, putative (EC:1.3.1.74)
nr
ID XP_002529745.1
description sugar transporter, putative [Ricinus communis]
swissprot
ID Q8VZR6
description Inositol transporter 1 OS=Arabidopsis thaliana GN=INT1 PE=1 SV=1
trembl
ID B9SUS6
description Sugar transporter, putative OS=Ricinus communis GN=RCOM_0573930 PE=3 SV=1
Gene Ontology
ID GO:0016021
description inositol transporter 1 isoform x2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_21831: 55298-55435
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000211_030 0.0 - - sugar transporter, putative [Ricinus communis]
2 Hb_000805_110 0.1016627046 - - PREDICTED: uncharacterized protein C24B11.05 [Jatropha curcas]
3 Hb_008643_200 0.1171165752 transcription factor TF Family: BES1 PREDICTED: BES1/BZR1 homolog protein 4 [Vitis vinifera]
4 Hb_189216_030 0.1291318896 - - Pleiotropic drug resistance protein, putative [Ricinus communis]
5 Hb_002217_020 0.1487298399 - - PREDICTED: uncharacterized protein LOC105643601 isoform X1 [Jatropha curcas]
6 Hb_003362_030 0.1524395736 - - hypothetical protein POPTR_0017s08440g [Populus trichocarpa]
7 Hb_001856_200 0.1543873277 - - Esterase PIR7B, putative [Ricinus communis]
8 Hb_009620_020 0.1555727411 - - conserved hypothetical protein [Ricinus communis]
9 Hb_004052_050 0.1560484063 - - PREDICTED: uncharacterized protein LOC105640640 [Jatropha curcas]
10 Hb_007044_120 0.1600221066 - - PREDICTED: probable transmembrane ascorbate ferrireductase 2 [Jatropha curcas]
11 Hb_003582_040 0.1621755687 transcription factor TF Family: C2H2 hypothetical protein POPTR_0010s11160g [Populus trichocarpa]
12 Hb_000788_060 0.1637552409 - - PREDICTED: uncharacterized protein LOC105629705 [Jatropha curcas]
13 Hb_007317_010 0.1646624148 - - conserved hypothetical protein [Ricinus communis]
14 Hb_010407_180 0.1659277923 - - PREDICTED: phosphoenolpyruvate carboxylase kinase 1-like [Jatropha curcas]
15 Hb_004324_300 0.1675321427 - - hypothetical protein PRUPE_ppa012628mg [Prunus persica]
16 Hb_009486_020 0.1678399745 - - nucleoside diphosphate kinase 1 [Hevea brasiliensis]
17 Hb_148121_040 0.1681545843 transcription factor TF Family: BBR-BPC PREDICTED: protein BASIC PENTACYSTEINE2-like isoform X1 [Jatropha curcas]
18 Hb_011609_020 0.168229583 - - conserved hypothetical protein [Ricinus communis]
19 Hb_000327_380 0.1682733372 - - hypothetical protein JCGZ_06621 [Jatropha curcas]
20 Hb_020025_040 0.1686898659 - - sodium-bile acid cotransporter, putative [Ricinus communis]

Gene co-expression network

sample Hb_000211_030 Hb_000211_030 Hb_000805_110 Hb_000805_110 Hb_000211_030--Hb_000805_110 Hb_008643_200 Hb_008643_200 Hb_000211_030--Hb_008643_200 Hb_189216_030 Hb_189216_030 Hb_000211_030--Hb_189216_030 Hb_002217_020 Hb_002217_020 Hb_000211_030--Hb_002217_020 Hb_003362_030 Hb_003362_030 Hb_000211_030--Hb_003362_030 Hb_001856_200 Hb_001856_200 Hb_000211_030--Hb_001856_200 Hb_000309_130 Hb_000309_130 Hb_000805_110--Hb_000309_130 Hb_000805_110--Hb_002217_020 Hb_000367_160 Hb_000367_160 Hb_000805_110--Hb_000367_160 Hb_000086_140 Hb_000086_140 Hb_000805_110--Hb_000086_140 Hb_009904_010 Hb_009904_010 Hb_000805_110--Hb_009904_010 Hb_187679_010 Hb_187679_010 Hb_008643_200--Hb_187679_010 Hb_001159_110 Hb_001159_110 Hb_008643_200--Hb_001159_110 Hb_005074_030 Hb_005074_030 Hb_008643_200--Hb_005074_030 Hb_009620_020 Hb_009620_020 Hb_008643_200--Hb_009620_020 Hb_000413_010 Hb_000413_010 Hb_008643_200--Hb_000413_010 Hb_003994_190 Hb_003994_190 Hb_189216_030--Hb_003994_190 Hb_002374_080 Hb_002374_080 Hb_189216_030--Hb_002374_080 Hb_007044_120 Hb_007044_120 Hb_189216_030--Hb_007044_120 Hb_189216_030--Hb_009620_020 Hb_020025_040 Hb_020025_040 Hb_189216_030--Hb_020025_040 Hb_022250_060 Hb_022250_060 Hb_002217_020--Hb_022250_060 Hb_007317_010 Hb_007317_010 Hb_002217_020--Hb_007317_010 Hb_003657_010 Hb_003657_010 Hb_002217_020--Hb_003657_010 Hb_136509_010 Hb_136509_010 Hb_002217_020--Hb_136509_010 Hb_002217_020--Hb_001856_200 Hb_000164_020 Hb_000164_020 Hb_002217_020--Hb_000164_020 Hb_000457_180 Hb_000457_180 Hb_003362_030--Hb_000457_180 Hb_001341_150 Hb_001341_150 Hb_003362_030--Hb_001341_150 Hb_011609_020 Hb_011609_020 Hb_003362_030--Hb_011609_020 Hb_148121_040 Hb_148121_040 Hb_003362_030--Hb_148121_040 Hb_008071_020 Hb_008071_020 Hb_003362_030--Hb_008071_020 Hb_021068_040 Hb_021068_040 Hb_003362_030--Hb_021068_040 Hb_001825_060 Hb_001825_060 Hb_001856_200--Hb_001825_060 Hb_000987_060 Hb_000987_060 Hb_001856_200--Hb_000987_060 Hb_000210_010 Hb_000210_010 Hb_001856_200--Hb_000210_010 Hb_141990_040 Hb_141990_040 Hb_001856_200--Hb_141990_040 Hb_000009_450 Hb_000009_450 Hb_001856_200--Hb_000009_450
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
69.28 122.576 157.495 127.431 38.8939 30.8025
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
182.463 155.159 220.199 55.9786 21.2399

CAGE analysis