Hb_001159_110

Information

Type -
Description -
Location Contig1159: 100584-102781
Sequence    

Annotation

kegg
ID rcu:RCOM_1681060
description hypothetical protein
nr
ID XP_012087085.1
description PREDICTED: uncharacterized protein At4g22758 [Jatropha curcas]
swissprot
ID Q56XJ7
description Uncharacterized protein At4g22758 OS=Arabidopsis thaliana GN=At4g22758 PE=2 SV=1
trembl
ID A0A067JNM7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20742 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_04776: 100626-101564 , PASA_asmbl_04777: 102366-102769
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001159_110 0.0 - - PREDICTED: uncharacterized protein At4g22758 [Jatropha curcas]
2 Hb_000230_390 0.0740751322 - - PREDICTED: F-box/kelch-repeat protein At3g23880 [Jatropha curcas]
3 Hb_005074_030 0.0826294068 - - -
4 Hb_000614_250 0.0841033009 - - PREDICTED: serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' theta isoform-like [Jatropha curcas]
5 Hb_004453_050 0.0864761837 - - PREDICTED: uncharacterized protein LOC105637675 [Jatropha curcas]
6 Hb_000430_020 0.0867595974 - - -
7 Hb_007508_090 0.0877075523 - - PREDICTED: exocyst complex component EXO70B1 [Jatropha curcas]
8 Hb_000840_250 0.0900915466 - - PREDICTED: autophagy-related protein 13 [Jatropha curcas]
9 Hb_001633_210 0.0906773593 - - PREDICTED: RING finger protein 10 isoform X2 [Jatropha curcas]
10 Hb_136509_010 0.0911849511 - - calmodulin-binding heat-shock protein, putative [Ricinus communis]
11 Hb_004994_140 0.0922972302 - - PREDICTED: digalactosyldiacylglycerol synthase 2, chloroplastic [Jatropha curcas]
12 Hb_000538_230 0.0962448523 - - PREDICTED: auxin response factor 8 isoform X1 [Jatropha curcas]
13 Hb_000710_060 0.0963737703 transcription factor TF Family: NAC PREDICTED: uncharacterized protein LOC105645554 isoform X2 [Jatropha curcas]
14 Hb_000005_080 0.0967923169 - - PREDICTED: cyclin-dependent kinases regulatory subunit 1 [Elaeis guineensis]
15 Hb_000189_560 0.1001425697 transcription factor TF Family: GeBP PREDICTED: mediator-associated protein 1 [Jatropha curcas]
16 Hb_007532_030 0.1017572247 - - PREDICTED: F-box/kelch-repeat protein At1g30090 [Jatropha curcas]
17 Hb_000069_420 0.1027809431 - - Beclin-1, putative [Ricinus communis]
18 Hb_008226_060 0.1030251528 - - PREDICTED: folic acid synthesis protein fol1-like [Jatropha curcas]
19 Hb_000185_030 0.1038281319 - - PREDICTED: arginine-glutamic acid dipeptide repeats protein-like isoform X2 [Jatropha curcas]
20 Hb_001014_030 0.1049728231 - - ATP binding protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_001159_110 Hb_001159_110 Hb_000230_390 Hb_000230_390 Hb_001159_110--Hb_000230_390 Hb_005074_030 Hb_005074_030 Hb_001159_110--Hb_005074_030 Hb_000614_250 Hb_000614_250 Hb_001159_110--Hb_000614_250 Hb_004453_050 Hb_004453_050 Hb_001159_110--Hb_004453_050 Hb_000430_020 Hb_000430_020 Hb_001159_110--Hb_000430_020 Hb_007508_090 Hb_007508_090 Hb_001159_110--Hb_007508_090 Hb_000230_390--Hb_007508_090 Hb_000840_250 Hb_000840_250 Hb_000230_390--Hb_000840_250 Hb_007532_030 Hb_007532_030 Hb_000230_390--Hb_007532_030 Hb_001014_030 Hb_001014_030 Hb_000230_390--Hb_001014_030 Hb_003371_090 Hb_003371_090 Hb_000230_390--Hb_003371_090 Hb_005074_030--Hb_000430_020 Hb_001123_060 Hb_001123_060 Hb_005074_030--Hb_001123_060 Hb_000538_230 Hb_000538_230 Hb_005074_030--Hb_000538_230 Hb_000649_130 Hb_000649_130 Hb_005074_030--Hb_000649_130 Hb_000749_050 Hb_000749_050 Hb_005074_030--Hb_000749_050 Hb_000614_250--Hb_000840_250 Hb_001633_210 Hb_001633_210 Hb_000614_250--Hb_001633_210 Hb_000614_250--Hb_001014_030 Hb_002450_020 Hb_002450_020 Hb_000614_250--Hb_002450_020 Hb_000710_060 Hb_000710_060 Hb_000614_250--Hb_000710_060 Hb_003847_030 Hb_003847_030 Hb_000614_250--Hb_003847_030 Hb_004453_050--Hb_001633_210 Hb_007416_320 Hb_007416_320 Hb_004453_050--Hb_007416_320 Hb_000120_470 Hb_000120_470 Hb_004453_050--Hb_000120_470 Hb_004453_050--Hb_000614_250 Hb_008173_110 Hb_008173_110 Hb_004453_050--Hb_008173_110 Hb_001545_170 Hb_001545_170 Hb_004453_050--Hb_001545_170 Hb_000430_020--Hb_000538_230 Hb_015807_150 Hb_015807_150 Hb_000430_020--Hb_015807_150 Hb_000890_150 Hb_000890_150 Hb_000430_020--Hb_000890_150 Hb_000178_130 Hb_000178_130 Hb_000430_020--Hb_000178_130 Hb_007508_090--Hb_003371_090 Hb_007508_090--Hb_007532_030 Hb_007508_090--Hb_000710_060 Hb_000189_560 Hb_000189_560 Hb_007508_090--Hb_000189_560 Hb_000213_100 Hb_000213_100 Hb_007508_090--Hb_000213_100
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.7879 5.63461 2.06135 4.35207 1.79418 3.65083
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
5.41165 6.4017 6.43616 3.53129 1.70459

CAGE analysis