Hb_000077_250

Information

Type -
Description -
Location Contig77: 210921-214320
Sequence    

Annotation

kegg
ID pop:POPTR_0019s13260g
description hypothetical protein
nr
ID KDP24145.1
description hypothetical protein JCGZ_25802 [Jatropha curcas]
swissprot
ID Q01484
description Ankyrin-2 OS=Homo sapiens GN=ANK2 PE=1 SV=4
trembl
ID A0A067JVY7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25802 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_57599: 211666-213188
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000077_250 0.0 - - hypothetical protein JCGZ_25802 [Jatropha curcas]
2 Hb_002997_150 0.0827330721 - - hypothetical protein RCOM_1406750 [Ricinus communis]
3 Hb_020375_010 0.0830787855 - - PREDICTED: transcription factor IBH1 [Jatropha curcas]
4 Hb_004650_120 0.0845284651 - - PREDICTED: auxin transporter-like protein 3 [Jatropha curcas]
5 Hb_007185_050 0.0915935797 - - hypothetical protein JCGZ_22475 [Jatropha curcas]
6 Hb_004020_030 0.0923509956 - - Magnesium and cobalt efflux protein corC, putative [Ricinus communis]
7 Hb_009070_020 0.0956558646 - - PREDICTED: uncharacterized protein LOC102612959 [Citrus sinensis]
8 Hb_001225_050 0.0971797861 transcription factor TF Family: LIM Cysteine and glycine-rich protein, putative [Ricinus communis]
9 Hb_000358_060 0.0996195376 - - PREDICTED: pathogenesis-related protein 5-like [Jatropha curcas]
10 Hb_009783_010 0.1012528947 - - PREDICTED: sulfated surface glycoprotein 185-like [Populus euphratica]
11 Hb_000009_280 0.1035639772 - - Calmodulin, putative [Ricinus communis]
12 Hb_001104_060 0.1064881156 - - PREDICTED: glucomannan 4-beta-mannosyltransferase 9 [Jatropha curcas]
13 Hb_100732_020 0.1074426883 - - hypothetical protein POPTR_0001s15930g [Populus trichocarpa]
14 Hb_009023_010 0.1087174421 - - glycosyl hydrolase family 31 family protein [Populus trichocarpa]
15 Hb_002471_130 0.1092151263 - - PREDICTED: probable transmembrane ascorbate ferrireductase 3 [Jatropha curcas]
16 Hb_002073_270 0.1094472643 desease resistance Gene Name: TIR PREDICTED: protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1-like [Jatropha curcas]
17 Hb_004032_290 0.11130822 - - protein binding protein, putative [Ricinus communis]
18 Hb_000230_410 0.1116454009 - - PREDICTED: uncharacterized protein LOC105631891 [Jatropha curcas]
19 Hb_031984_020 0.1116778613 - - conserved hypothetical protein [Ricinus communis]
20 Hb_001279_400 0.1121440319 - - PREDICTED: uncharacterized protein LOC105633544 [Jatropha curcas]

Gene co-expression network

sample Hb_000077_250 Hb_000077_250 Hb_002997_150 Hb_002997_150 Hb_000077_250--Hb_002997_150 Hb_020375_010 Hb_020375_010 Hb_000077_250--Hb_020375_010 Hb_004650_120 Hb_004650_120 Hb_000077_250--Hb_004650_120 Hb_007185_050 Hb_007185_050 Hb_000077_250--Hb_007185_050 Hb_004020_030 Hb_004020_030 Hb_000077_250--Hb_004020_030 Hb_009070_020 Hb_009070_020 Hb_000077_250--Hb_009070_020 Hb_001225_050 Hb_001225_050 Hb_002997_150--Hb_001225_050 Hb_002388_070 Hb_002388_070 Hb_002997_150--Hb_002388_070 Hb_028514_010 Hb_028514_010 Hb_002997_150--Hb_028514_010 Hb_002997_150--Hb_004020_030 Hb_000358_060 Hb_000358_060 Hb_002997_150--Hb_000358_060 Hb_000000_050 Hb_000000_050 Hb_020375_010--Hb_000000_050 Hb_000813_070 Hb_000813_070 Hb_020375_010--Hb_000813_070 Hb_009522_010 Hb_009522_010 Hb_020375_010--Hb_009522_010 Hb_004787_120 Hb_004787_120 Hb_020375_010--Hb_004787_120 Hb_000620_040 Hb_000620_040 Hb_020375_010--Hb_000620_040 Hb_000009_280 Hb_000009_280 Hb_004650_120--Hb_000009_280 Hb_001511_220 Hb_001511_220 Hb_004650_120--Hb_001511_220 Hb_000676_230 Hb_000676_230 Hb_004650_120--Hb_000676_230 Hb_004032_290 Hb_004032_290 Hb_004650_120--Hb_004032_290 Hb_001104_060 Hb_001104_060 Hb_004650_120--Hb_001104_060 Hb_004650_120--Hb_007185_050 Hb_001136_040 Hb_001136_040 Hb_007185_050--Hb_001136_040 Hb_007185_050--Hb_000009_280 Hb_007185_050--Hb_004032_290 Hb_002874_200 Hb_002874_200 Hb_007185_050--Hb_002874_200 Hb_009783_010 Hb_009783_010 Hb_007185_050--Hb_009783_010 Hb_001898_040 Hb_001898_040 Hb_007185_050--Hb_001898_040 Hb_004020_030--Hb_004032_290 Hb_004020_030--Hb_001104_060 Hb_004020_030--Hb_002388_070 Hb_004020_030--Hb_007185_050 Hb_000230_410 Hb_000230_410 Hb_004020_030--Hb_000230_410 Hb_000680_060 Hb_000680_060 Hb_009070_020--Hb_000680_060 Hb_009070_020--Hb_009522_010 Hb_009070_020--Hb_000009_280 Hb_000161_140 Hb_000161_140 Hb_009070_020--Hb_000161_140 Hb_009070_020--Hb_007185_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0953628 0.239232 1.02128 0.0195857 0.00855757
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.00695577 0.517569

CAGE analysis