Hb_000046_010

Information

Type -
Description -
Location Contig46: 8691-11286
Sequence    

Annotation

kegg
ID rcu:RCOM_0679080
description Histidine-containing phosphotransfer protein, putative (EC:1.3.1.74)
nr
ID XP_012069450.1
description PREDICTED: histidine-containing phosphotransfer protein 1 [Jatropha curcas]
swissprot
ID Q9ZNV9
description Histidine-containing phosphotransfer protein 1 OS=Arabidopsis thaliana GN=AHP1 PE=1 SV=1
trembl
ID A0A067KYI6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02051 PE=4 SV=1
Gene Ontology
ID GO:0005622
description histidine-containing phosphotransfer protein 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_43594: 8696-10508 , PASA_asmbl_43595: 8696-9782 , PASA_asmbl_43596: 9786-10516
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000046_010 0.0 - - PREDICTED: histidine-containing phosphotransfer protein 1 [Jatropha curcas]
2 Hb_001718_090 0.0495603898 - - PREDICTED: coiled-coil domain-containing protein 97 [Jatropha curcas]
3 Hb_000441_070 0.0586865648 transcription factor TF Family: C3H PREDICTED: 30-kDa cleavage and polyadenylation specificity factor 30 isoform X1 [Jatropha curcas]
4 Hb_000025_360 0.0615480711 - - PREDICTED: protein SMG7 isoform X1 [Jatropha curcas]
5 Hb_000510_310 0.0627396252 transcription factor TF Family: bHLH PREDICTED: transcription factor UNE12-like [Jatropha curcas]
6 Hb_006252_020 0.0631394299 - - PREDICTED: SET and MYND domain-containing protein 4 isoform X2 [Jatropha curcas]
7 Hb_002188_110 0.0699566492 desease resistance Gene Name: NB-ARC phosphoprotein phosphatase, putative [Ricinus communis]
8 Hb_002783_310 0.071335186 - - PREDICTED: tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit trm6 [Jatropha curcas]
9 Hb_000244_220 0.0717816817 - - PREDICTED: bifunctional aspartokinase/homoserine dehydrogenase 1, chloroplastic-like [Jatropha curcas]
10 Hb_000487_290 0.0738589002 - - ribonucleic acid binding protein S1, putative [Ricinus communis]
11 Hb_003785_040 0.073913763 - - PREDICTED: R3H domain-containing protein 2-like isoform X1 [Jatropha curcas]
12 Hb_007676_100 0.0754532329 - - PREDICTED: uncharacterized protein LOC105646857 [Jatropha curcas]
13 Hb_004128_050 0.0756502701 transcription factor TF Family: C3H zinc finger protein, putative [Ricinus communis]
14 Hb_000136_090 0.076915737 - - programmed cell death protein, putative [Ricinus communis]
15 Hb_001454_280 0.0803211385 - - PREDICTED: chaperone protein dnaJ 49 [Jatropha curcas]
16 Hb_003935_030 0.081754131 - - PREDICTED: 14-3-3-like protein GF14 kappa isoform X2 [Jatropha curcas]
17 Hb_031527_020 0.0817908811 - - PREDICTED: pre-mRNA-splicing factor 38B isoform X1 [Jatropha curcas]
18 Hb_001912_100 0.0818534933 - - PREDICTED: uncharacterized protein LOC105636609 [Jatropha curcas]
19 Hb_000345_140 0.0828016413 - - PREDICTED: autophagy-related protein 18a-like [Jatropha curcas]
20 Hb_183963_030 0.0829134155 - - DNA binding protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_000046_010 Hb_000046_010 Hb_001718_090 Hb_001718_090 Hb_000046_010--Hb_001718_090 Hb_000441_070 Hb_000441_070 Hb_000046_010--Hb_000441_070 Hb_000025_360 Hb_000025_360 Hb_000046_010--Hb_000025_360 Hb_000510_310 Hb_000510_310 Hb_000046_010--Hb_000510_310 Hb_006252_020 Hb_006252_020 Hb_000046_010--Hb_006252_020 Hb_002188_110 Hb_002188_110 Hb_000046_010--Hb_002188_110 Hb_001718_090--Hb_000441_070 Hb_001718_090--Hb_000025_360 Hb_001718_090--Hb_006252_020 Hb_003785_040 Hb_003785_040 Hb_001718_090--Hb_003785_040 Hb_000529_260 Hb_000529_260 Hb_001718_090--Hb_000529_260 Hb_000322_150 Hb_000322_150 Hb_000441_070--Hb_000322_150 Hb_004480_040 Hb_004480_040 Hb_000441_070--Hb_004480_040 Hb_076693_020 Hb_076693_020 Hb_000441_070--Hb_076693_020 Hb_000169_130 Hb_000169_130 Hb_000441_070--Hb_000169_130 Hb_045793_010 Hb_045793_010 Hb_000025_360--Hb_045793_010 Hb_000025_360--Hb_002188_110 Hb_183963_030 Hb_183963_030 Hb_000025_360--Hb_183963_030 Hb_000107_500 Hb_000107_500 Hb_000025_360--Hb_000107_500 Hb_000510_310--Hb_006252_020 Hb_000417_160 Hb_000417_160 Hb_000510_310--Hb_000417_160 Hb_000567_010 Hb_000567_010 Hb_000510_310--Hb_000567_010 Hb_000510_310--Hb_000107_500 Hb_000645_120 Hb_000645_120 Hb_000510_310--Hb_000645_120 Hb_002174_020 Hb_002174_020 Hb_006252_020--Hb_002174_020 Hb_004659_080 Hb_004659_080 Hb_006252_020--Hb_004659_080 Hb_003044_020 Hb_003044_020 Hb_006252_020--Hb_003044_020 Hb_004128_050 Hb_004128_050 Hb_006252_020--Hb_004128_050 Hb_001454_280 Hb_001454_280 Hb_006252_020--Hb_001454_280 Hb_008112_030 Hb_008112_030 Hb_006252_020--Hb_008112_030 Hb_002188_110--Hb_183963_030 Hb_000959_040 Hb_000959_040 Hb_002188_110--Hb_000959_040 Hb_007676_100 Hb_007676_100 Hb_002188_110--Hb_007676_100 Hb_002188_110--Hb_000441_070 Hb_001247_070 Hb_001247_070 Hb_002188_110--Hb_001247_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
24.1146 29.0869 9.55163 10.6641 30.5578 25.3818
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
13.3902 16.1407 15.6648 19.1722 9.38123

CAGE analysis