Gene annotation
| Transcriptome id | Sobic.003G376700.1 |
|---|---|
| Synonym | PGSIP1, GUX1, Sb03g041660 |
| Functional annotation | glycosyl transferase, putative, expressed |
| UniProt | C5XRE4 |
| Pfam | PF01501 |
| Panther DB | PTHR11183 PTHR11183:SF62 |
| NCBI CDD | KOG1950; Glycosyl transferase, family 8 - glycogenin |
| KEGG Orthology | - |
| Gene Ontology | GO:0016757; glycosyltransferase activity |
Orthologs (automatic annotation)
| TAIR | AT3G18660 : plant glycogenin-like starch initiation protein 1 |
|---|---|
| RAP-DB (Rice) | LOC_Os01g65780.2 : glycosyl transferase, putative, expressed |
| MaizeGDB (Corn) | Zm00025a043746 , Zm00025a039505 , Zm00025a026577 |
| Brachypodium | KQK10880 |
| Barley | HORVU3Hr1G091400.7 , HORVU3Hr1G091400.6 , HORVU3Hr1G091400.5 , HORVU0Hr1G000670.2 , HORVU3Hr1G091400.3 , HORVU3Hr1G091400.2 , HORVU3Hr1G091400.1 , HORVU3Hr1G091400.4 , HORVU1Hr1G065560.1 , HORVU1Hr1G065560.3 , HORVU1Hr1G065560.2 , HORVU1Hr1G065560.5 , HORVU1Hr1G065560.4 , HORVU1Hr1G065560.6 , HORVU0Hr1G000650.2 , HORVU0Hr1G000650.1 |
| Wheat | TraesCS3B02G442700 , TraesCS3B02G442700 , TraesCS3B02G442700 , TraesCS3D02G404100 , TraesCS1B02G277500 , TraesCS1D02G266700 , TraesCS1D02G266700 , TraesCS3D02G404100 , TraesCS3A02G409200 , TraesCS3A02G409200 , TraesCS1A02G266600 , TraesCS1A02G266600 |
| Populus | PNT35176 , PNT35177 , PNT35174 , PNT35175 , PNT37431 , PNT37430 , PNT37432 |
JBrowse
| Sobic.003G376700 |
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.001G441600 | potyvirus VPg interacting protein, putative, expressed | - |
| 2 | Sobic.006G218700 | tyrosine protein kinase domain containing protein, putative, expressed | - |
| 3 | Sobic.009G134600 | gibberellin receptor GID1L2, putative, expressed | K14493: gibberellin receptor GID1 |
| 4 | Sobic.002G330300 | chitin-inducible gibberellin-responsive protein, putative, expressed | - |
| 5 | Sobic.009G152200 | OsFBT7 - F-box and tubby domain containing protein, expressed | - |
| 6 | Sobic.001G420700 | clathrin assembly protein, putative, expressed | - |
| 7 | Sobic.001G076000 | PHLOEM 2-LIKE A10, putative, expressed | - |
| 8 | Sobic.003G052400 | proline-rich family protein, putative, expressed | - |
| 9 | Sobic.008G016900 | glucosamine--fructose-6-phosphate aminotransferase 1, putative, expressed | K00820: glmS, glutamine---fructose-6-phosphate transaminase (isomerizing) |
| 10 | Sobic.008G188700 | zinc finger, C3HC4 type domain containing protein, expressed | K10666: E3 ubiquitin-protein ligase RNF5 |
| 11 | Sobic.009G230700 | Trihelix Family(PubMedID : 24864043)@transcription factor like protein, putative, expressed | - |
| 12 | Sobic.008G161000 | protein kinase domain containing protein, expressed | - |
| 13 | Sobic.001G341100 | mps one binder kinase activator-like 1A, putative, expressed | K06685: MOB1, MOB kinase activator 1 |
| 14 | Sobic.003G119800 | Expressed in older stem(PubMedID : 28649278)@no apical meristem protein, putative, expressed | - |
| 15 | Sobic.003G056500 | staphylococcal nuclease homologue, putative, expressed | - |
| 16 | Sobic.009G195900 | OsFBT9 - F-box and tubby domain containing protein, expressed | - |
| 17 | Sobic.007G178200 | ER lumen protein retaining receptor, putative, expressed | - |
| 18 | Sobic.006G208800 | YT521-B, putative, expressed | - |
| 19 | Sobic.007G011000 | synaptobrevin-related family protein, putative, expressed | - |
| 20 | Sobic.007G026100 | Divergent PAP2 family domain containing protein, expressed | K09775: uncharacterized protein |
Gene co-expression network
Octagon: transcription factors
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