Gene annotation
| Transcriptome id | Sobic.007G026100.1 |
|---|---|
| Synonym | Sb07g002280 |
| Functional annotation | Divergent PAP2 family domain containing protein, expressed |
| UniProt | C5YMK3 |
| Pfam | PF02681 |
| Panther DB | PTHR31446 PTHR31446:SF5 |
| NCBI CDD | - |
| KEGG Orthology | K09775; uncharacterized protein |
| Gene Ontology | - |
Orthologs (automatic annotation)
| TAIR | AT1G67600 : Acid phosphatase/vanadium-dependent haloperoxidase-related protein |
|---|---|
| RAP-DB (Rice) | LOC_Os08g03370.1 : Divergent PAP2 family domain containing protein, expressed |
| MaizeGDB (Corn) | Zm00025a031536 , Zm00025a040352 , Zm00025a011098 |
| Brachypodium | KQJ94932 |
| Barley | HORVU7Hr1G074550.18 , HORVU7Hr1G074550.19 , HORVU7Hr1G074550.12 , HORVU7Hr1G074550.13 , HORVU7Hr1G074550.11 , HORVU7Hr1G074550.16 , HORVU7Hr1G074550.10 , HORVU7Hr1G074550.15 , HORVU7Hr1G074550.17 , HORVU7Hr1G074550.14 , HORVU7Hr1G074550.1 , HORVU7Hr1G074550.2 , HORVU7Hr1G074550.3 , HORVU7Hr1G074550.4 , HORVU7Hr1G074550.5 , HORVU7Hr1G074550.6 , HORVU7Hr1G074550.7 , HORVU7Hr1G074550.8 , HORVU7Hr1G074550.9 |
| Wheat | TraesCS7D02G309000 , TraesCS7B02G212300 , TraesCS7A02G312600 , TraesCS7A02G312600 |
| Populus | - |
JBrowse
Expression pattern by RNA-Seq analysis
 |
Find similar expressed genes
 |
| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.008G188700 | zinc finger, C3HC4 type domain containing protein, expressed | K10666: E3 ubiquitin-protein ligase RNF5 |
| 2 | Sobic.004G231400 | OsAPRL3 adenosine 5\'-phosphosulfate reductase-like OsAPRL3, expressed | - |
| 3 | Sobic.004G079100 | zinc finger A20 and AN1 domain-containing stress-associated protein, putative, expressed | - |
| 4 | Sobic.003G332401 | - | K07937: ADP-ribosylation factor 1/2 K07977: Arf/Sar family, other |
| 5 | Sobic.004G274700 | SNARE associated Golgi protein, putative, expressed | - |
| 6 | Sobic.005G046100 | bZIP transcription factor domain containing protein, expressed | - |
| 7 | Sobic.001G478300 | modifier of rudimentary protein, expressed | K12185: ESCRT-I complex subunit VPS37 |
| 8 | Sobic.001G149700 | vesicle transport v-SNARE protein, putative, expressed | K08496: GOSR2, golgi SNAP receptor complex member 2 |
| 9 | Sobic.006G160600 | histidine triad family protein, putative, expressed | - |
| 10 | Sobic.001G028400 | domain of unknown function domain containing protein, expressed | - |
| 11 | Sobic.010G055500 | RNA-binding motif protein, putative, expressed | K12872: RBM22, pre-mRNA-splicing factor RBM22/SLT11 |
| 12 | Sobic.003G317200 | vacuolar protein sorting-associated protein 28 homolog 2, putative, expressed | K12184: ESCRT-I complex subunit VPS28 |
| 13 | Sobic.010G071200 | "Belonging to the Sdw3 locus, Sbi_sdw3"(PubMedID : 20464438)@ubiquitin-conjugating enzyme, putative, expressed | K04554: UBE2J2, NCUBE2, ubiquitin-conjugating enzyme E2 J2 |
| 14 | Sobic.003G273100 | vesicle transport v-SNARE protein, putative, expressed | K08493: vesicle transport through interaction with t-SNAREs 1 |
| 15 | Sobic.001G441600 | potyvirus VPg interacting protein, putative, expressed | - |
| 16 | Sobic.006G109300 | protein binding protein, putative, expressed | - |
| 17 | Sobic.004G198000 | protein kinase domain containing protein, expressed | K08857: NIMA (never in mitosis gene a)-related kinase 1/4/5 |
| 18 | Sobic.001G076000 | PHLOEM 2-LIKE A10, putative, expressed | - |
| 19 | Sobic.001G061700 | "similar to BTB/POZ domain containing protein, expressed"(PubMedID : 29862293)@MBTB3 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed | K10523: speckle-type POZ protein |
| 20 | Sobic.001G138300 | zinc finger, C3HC4 type domain containing protein, expressed | K10666: E3 ubiquitin-protein ligase RNF5 |
Gene co-expression network
Octagon: transcription factors
© 2015- RIKEN, All rights reserved.
