Gene annotation
Transcriptome id Sobic.008G016900.1
Synonym Sb08g001480
Functional annotation glucosamine--fructose-6-phosphate aminotransferase 1, putative, expressed
UniProt C5YQM9
Pfam PF13522 PF01380
Panther DB PTHR10937 PTHR10937:SF0
NCBI CDD -
KEGG Orthology K00820; glmS, glutamine---fructose-6-phosphate transaminase (isomerizing)
Gene Ontology GO:0005975; carbohydrate metabolic process GO:0004360glutamine-fructose-6-phosphate transaminase (isomerizing) activity


Orthologs (automatic annotation)
TAIR AT3G24090 : glutamine-fructose-6-phosphate transaminase (isomerizing)s;sugar binding;transaminases
RAP-DB (Rice) LOC_Os12g03720.1 : glucosamine--fructose-6-phosphate aminotransferase 1, putative, expressed
MaizeGDB (Corn) Zm00025a028966
Brachypodium KQJ89560 , KQJ92430
Barley HORVU4Hr1G026230.39 , HORVU4Hr1G026230.38 , HORVU4Hr1G026230.37 , HORVU4Hr1G026230.36 , HORVU4Hr1G026230.35 , HORVU4Hr1G026230.34 , HORVU4Hr1G026230.33 , HORVU4Hr1G026230.32 , HORVU4Hr1G026230.31 , HORVU4Hr1G026230.30 , HORVU4Hr1G026230.28 , HORVU4Hr1G026230.29 , HORVU4Hr1G026230.24 , HORVU4Hr1G026230.25 , HORVU4Hr1G026230.26 , HORVU4Hr1G026230.27 , HORVU4Hr1G026230.20 , HORVU4Hr1G026230.21 , HORVU4Hr1G026230.22 , HORVU4Hr1G026230.23 , HORVU5Hr1G044770.1 , HORVU5Hr1G044770.3 , HORVU5Hr1G044770.2 , HORVU5Hr1G044770.5 , HORVU5Hr1G044770.4 , HORVU5Hr1G044770.7 , HORVU5Hr1G044770.6 , HORVU4Hr1G026230.11 , HORVU4Hr1G026230.10 , HORVU4Hr1G026230.13 , HORVU4Hr1G026230.12 , HORVU4Hr1G026230.15 , HORVU4Hr1G026230.14 , HORVU4Hr1G026230.17 , HORVU4Hr1G026230.16 , HORVU4Hr1G026230.19 , HORVU4Hr1G026230.18 , HORVU4Hr1G026230.5 , HORVU4Hr1G026230.4 , HORVU4Hr1G026230.7 , HORVU4Hr1G026230.6 , HORVU4Hr1G026230.3 , HORVU4Hr1G026230.2 , HORVU4Hr1G026230.9 , HORVU4Hr1G026230.8 , HORVU4Hr1G026230.55 , HORVU4Hr1G026230.54 , HORVU4Hr1G026230.57 , HORVU4Hr1G026230.56 , HORVU4Hr1G026230.51 , HORVU4Hr1G026230.50 , HORVU4Hr1G026230.53 , HORVU4Hr1G026230.52 , HORVU4Hr1G026230.58 , HORVU5Hr1G044780.1 , HORVU5Hr1G044780.2 , HORVU5Hr1G044780.3 , HORVU5Hr1G044780.4 , HORVU5Hr1G044780.5 , HORVU5Hr1G044780.6 , HORVU5Hr1G044780.7 , HORVU4Hr1G026230.48 , HORVU4Hr1G026230.49 , HORVU4Hr1G026230.42 , HORVU4Hr1G026230.43 , HORVU4Hr1G026230.40 , HORVU4Hr1G026230.41 , HORVU4Hr1G026230.46 , HORVU4Hr1G026230.47 , HORVU4Hr1G026230.44 , HORVU4Hr1G026230.45
Wheat TraesCS4A02G187100 , TraesCS4A02G187100 , TraesCS4D02G126400 , TraesCS4D02G126400 , TraesCS5A02G139500 , TraesCS5B02G137000 , TraesCS5B02G137000 , TraesCS4B02G130800 , TraesCS5D02G153200
Populus -


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cDNA sequences
Sobic.008G016900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G330300 chitin-inducible gibberellin-responsive protein, putative, expressed -
2 Sobic.002G379400 CAMK_CAMK_like.7 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K14498: serine/threonine-protein kinase SRK2
3 Sobic.010G062800 transporter, major facilitator family, putative, expressed K13783: MFS transporter, OPA family, solute carrier family 37 (glycerol-3-phosphate transporter), member 1/2
4 Sobic.001G283500 VHS and GAT domain containing protein, expressed -
5 Sobic.007G188100 Candidate orthologue to the wheat Pm40 gene(PubMedID : 27755575)@protein kinase domain containing protein, expressed K13429: chitin elicitor receptor kinase 1
6 Sobic.004G145200 membrane attack complex component/perforin/complement C9, putative, expressed -
7 Sobic.001G162100 WRKY94, expressed -
8 Sobic.009G059700 thioredoxin, putative, expressed K03671: thioredoxin 1
9 Sobic.002G343500 CAMK_CAMK_like.34 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
10 Sobic.002G362900 IBS1, putative, expressed -
11 Sobic.001G525400 receptor-like protein kinase At3g46290 precursor, putative, expressed -
12 Sobic.010G228000 Protein kinase domain containing protein, expressed -
13 Sobic.006G263100 expressed protein -
14 Sobic.007G178200 ER lumen protein retaining receptor, putative, expressed -
15 Sobic.001G416600 NAD dependent epimerase/dehydratase family domain containing protein, expressed K12450: UDP-glucose 4,6-dehydratase
16 Sobic.002G214900 polygalacturonase, putative, expressed -
17 Sobic.001G434900 serine palmitoyltransferase 1, putative, expressed K00654: serine palmitoyltransferase
18 Sobic.004G280800 Tannin1 encodes a WD40 protein homologous to the Arabidopsis proanthocyanidin regulator transparent testa glabra1 (TTG1). (PubmedID : 25272193)@WD40 protein(PubMedID : 22699509)@Transcription factor for tannin accumulation in seed(PubMedID : 22699509)@WD domain, G-beta repeat domain containing protein, expressed K11805: DCAF7, DDB1- and CUL4-associated factor 7
19 Sobic.007G011000 synaptobrevin-related family protein, putative, expressed -
20 Sobic.010G204300 expressed protein -


Gene co-expression network
sample Sobic008G016900 Sobic008G016900 Sobic002G330300 Sobic002G330300 Sobic008G016900--Sobic002G330300 Sobic002G379400 Sobic002G379400 Sobic008G016900--Sobic002G379400 Sobic010G062800 Sobic010G062800 Sobic008G016900--Sobic010G062800 Sobic001G283500 Sobic001G283500 Sobic008G016900--Sobic001G283500 Sobic007G188100 Sobic007G188100 Sobic008G016900--Sobic007G188100 Sobic004G145200 Sobic004G145200 Sobic008G016900--Sobic004G145200 Sobic001G162100 Sobic001G162100 Sobic008G016900--Sobic001G162100 Sobic009G059700 Sobic009G059700 Sobic008G016900--Sobic009G059700 Sobic002G343500 Sobic002G343500 Sobic008G016900--Sobic002G343500 Sobic002G330300--Sobic008G016900 Sobic002G330300--Sobic002G379400 Sobic010G052800 Sobic010G052800 Sobic002G330300--Sobic010G052800 Sobic010G228000 Sobic010G228000 Sobic002G330300--Sobic010G228000 Sobic007G011000 Sobic007G011000 Sobic002G330300--Sobic007G011000 Sobic004G025000 Sobic004G025000 Sobic002G330300--Sobic004G025000 Sobic002G118600 Sobic002G118600 Sobic002G330300--Sobic002G118600 Sobic006G263100 Sobic006G263100 Sobic002G330300--Sobic006G263100 Sobic002G330300--Sobic007G188100 Sobic002G379400--Sobic004G025000 Sobic002G379400--Sobic002G330300 Sobic003G338900 Sobic003G338900 Sobic002G379400--Sobic003G338900 Sobic002G379400--Sobic008G016900 Sobic002G379400--Sobic010G228000 Sobic002G379400--Sobic002G118600 Sobic002G379400--Sobic006G263100 Sobic001G436000 Sobic001G436000 Sobic002G379400--Sobic001G436000 Sobic002G294700 Sobic002G294700 Sobic002G379400--Sobic002G294700 Sobic010G062800--Sobic008G016900 Sobic010G062800--Sobic007G188100 Sobic001G403700 Sobic001G403700 Sobic010G062800--Sobic001G403700 Sobic006G192500 Sobic006G192500 Sobic010G062800--Sobic006G192500 Sobic010G062800--Sobic010G228000 Sobic010G062800--Sobic001G283500 Sobic002G214900 Sobic002G214900 Sobic010G062800--Sobic002G214900 Sobic010G062800--Sobic004G145200 Sobic006G182100 Sobic006G182100 Sobic010G062800--Sobic006G182100 Sobic001G283500--Sobic008G016900 Sobic007G195701 Sobic007G195701 Sobic001G283500--Sobic007G195701 Sobic001G283500--Sobic001G403700 Sobic003G115800 Sobic003G115800 Sobic001G283500--Sobic003G115800 Sobic009G160200 Sobic009G160200 Sobic001G283500--Sobic009G160200 Sobic010G204300 Sobic010G204300 Sobic001G283500--Sobic010G204300 Sobic002G296300 Sobic002G296300 Sobic001G283500--Sobic002G296300 Sobic001G283500--Sobic010G062800 Sobic010G188100 Sobic010G188100 Sobic001G283500--Sobic010G188100 Sobic007G188100--Sobic010G228000 Sobic002G362900 Sobic002G362900 Sobic007G188100--Sobic002G362900 Sobic002G353400 Sobic002G353400 Sobic007G188100--Sobic002G353400 Sobic002G374100 Sobic002G374100 Sobic007G188100--Sobic002G374100 Sobic004G259500 Sobic004G259500 Sobic007G188100--Sobic004G259500 Sobic007G188100--Sobic008G016900 Sobic007G188100--Sobic002G330300 Sobic007G188100--Sobic010G062800 Sobic007G188100--Sobic002G118600 Sobic004G145200--Sobic010G228000 Sobic004G145200--Sobic008G016900 Sobic004G145200--Sobic007G188100 Sobic006G076201 Sobic006G076201 Sobic004G145200--Sobic006G076201 Sobic004G145200--Sobic010G062800 Sobic004G145200--Sobic002G362900 Sobic001G012800 Sobic001G012800 Sobic004G145200--Sobic001G012800 Sobic002G242500 Sobic002G242500 Sobic004G145200--Sobic002G242500 Sobic004G145200--Sobic002G118600 Sobic006G225600 Sobic006G225600 Sobic001G162100--Sobic006G225600 Sobic004G234900 Sobic004G234900 Sobic001G162100--Sobic004G234900 Sobic001G162100--Sobic009G059700 Sobic001G162100--Sobic008G016900 Sobic001G162100--Sobic010G062800 Sobic002G122700 Sobic002G122700 Sobic001G162100--Sobic002G122700 Sobic001G434900 Sobic001G434900 Sobic001G162100--Sobic001G434900 Sobic001G098200 Sobic001G098200 Sobic001G162100--Sobic001G098200 Sobic009G219900 Sobic009G219900 Sobic001G162100--Sobic009G219900 Sobic009G059700--Sobic001G162100 Sobic009G059700--Sobic008G016900 Sobic009G059700--Sobic001G283500 Sobic009G059700--Sobic006G225600 Sobic009G059700--Sobic002G330300 Sobic002G368400 Sobic002G368400 Sobic009G059700--Sobic002G368400 Sobic002G119800 Sobic002G119800 Sobic009G059700--Sobic002G119800 Sobic009G134600 Sobic009G134600 Sobic009G059700--Sobic009G134600 Sobic009G059700--Sobic010G062800 Sobic001G516600 Sobic001G516600 Sobic002G343500--Sobic001G516600 Sobic006G131400 Sobic006G131400 Sobic002G343500--Sobic006G131400 Sobic002G343500--Sobic002G353400 Sobic002G343500--Sobic002G374100 Sobic002G343500--Sobic006G182100 Sobic001G173300 Sobic001G173300 Sobic002G343500--Sobic001G173300 Sobic002G343500--Sobic010G228000 Sobic003G296700 Sobic003G296700 Sobic002G343500--Sobic003G296700 Sobic002G343500--Sobic002G294700
Octagon: transcription factors


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