Gene annotation
Transcriptome id Sobic.002G379400.1
Synonym SRK2E, ATOST1, SNRK2.6, P44, OST1, Sb02g039640, SNRK2-6
Functional annotation CAMK_CAMK_like.7 - CAMK includes calcium/calmodulin depedent protein kinases, expressed
UniProt C5X2H4
Pfam PF00069
Panther DB PTHR24343:SF207 PTHR24343
NCBI CDD KOG0583; Serine/threonine protein kinase
KEGG Orthology K14498; serine/threonine-protein kinase SRK2
Gene Ontology GO:0004672; protein kinase activity GO:0005524ATP binding GO:0006468protein phosphorylation


Orthologs (automatic annotation)
TAIR AT4G33950 : Protein kinase superfamily protein
RAP-DB (Rice) LOC_Os07g42940.1 : CAMK_CAMK_like.7 - CAMK includes calcium/calmodulin depedent protein kinases, expressed
MaizeGDB (Corn) Zm00025a048790 , Zm00025a052118
Brachypodium KQK15219 , KQK21434 , KQK21433 , KQK15218 , KQK15220
Barley HORVU2Hr1G029900.10 , HORVU2Hr1G029900.8 , HORVU2Hr1G029900.9 , HORVU2Hr1G029900.4 , HORVU2Hr1G029900.5 , HORVU2Hr1G029900.6 , HORVU2Hr1G029900.7 , HORVU2Hr1G029900.2 , HORVU2Hr1G029900.3
Wheat TraesCS2B02G189600 , TraesCS2B02G189600 , TraesCS2D02G493700 , TraesCS2B02G521800 , TraesCS2B02G189600 , TraesCS2A02G493800 , TraesCS2A02G163800 , TraesCS2A02G163800 , TraesCS2A02G163800 , TraesCS2A02G163800 , TraesCS2D02G170700 , TraesCS2D02G170700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G025000 CAMK_CAMK_like.12 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
2 Sobic.002G330300 chitin-inducible gibberellin-responsive protein, putative, expressed -
3 Sobic.003G338900 expressed protein -
4 Sobic.008G016900 glucosamine--fructose-6-phosphate aminotransferase 1, putative, expressed K00820: glmS, glutamine---fructose-6-phosphate transaminase (isomerizing)
5 Sobic.010G228000 Protein kinase domain containing protein, expressed -
6 Sobic.002G118600 SNARE domain containing protein, putative, expressed K18211: synaptosomal-associated protein 25
7 Sobic.006G263100 expressed protein -
8 Sobic.001G436000 expressed protein -
9 Sobic.002G294700 Trihelix Family(PubMedID : 24864043)@transcription factor like protein, putative, expressed -
10 Sobic.009G071800 6-phosphofructokinase, putative, expressed K00850: pfkA, 6-phosphofructokinase 1
11 Sobic.004G280800 Tannin1 encodes a WD40 protein homologous to the Arabidopsis proanthocyanidin regulator transparent testa glabra1 (TTG1). (PubmedID : 25272193)@WD40 protein(PubMedID : 22699509)@Transcription factor for tannin accumulation in seed(PubMedID : 22699509)@WD domain, G-beta repeat domain containing protein, expressed K11805: DCAF7, DDB1- and CUL4-associated factor 7
12 Sobic.002G374100 tran- scriptional repressor JASMONATE ZIM-DOMAIN(PubMedID : 25711704)@zinc-finger protein, putative, expressed K13464: jasmonate ZIM domain-containing protein
13 Sobic.003G296700 protein kinase domain containing protein, expressed -
14 Sobic.002G293300 octicosapeptide/Phox/Bem1p, putative, expressed -
15 Sobic.007G011000 synaptobrevin-related family protein, putative, expressed -
16 Sobic.002G343500 CAMK_CAMK_like.34 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
17 Sobic.003G111500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@polyprenyl synthetase, putative, expressed K13789: geranylgeranyl diphosphate synthase, type II
18 Sobic.009G208800 hydrolase, acting on carbon-nitrogen, putative, expressed -
19 Sobic.001G081600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@protein phosphatase 2C, putative, expressed -
20 Sobic.006G095600 lipoxygenase (LOX) that catalyzes the first committed step of JA biosynthesis(PubMedID : 31597271)@lipoxygenase protein, putative, expressed K00454: lipoxygenase


Gene co-expression network
sample Sobic002G379400 Sobic002G379400 Sobic004G025000 Sobic004G025000 Sobic002G379400--Sobic004G025000 Sobic002G330300 Sobic002G330300 Sobic002G379400--Sobic002G330300 Sobic003G338900 Sobic003G338900 Sobic002G379400--Sobic003G338900 Sobic008G016900 Sobic008G016900 Sobic002G379400--Sobic008G016900 Sobic010G228000 Sobic010G228000 Sobic002G379400--Sobic010G228000 Sobic002G118600 Sobic002G118600 Sobic002G379400--Sobic002G118600 Sobic006G263100 Sobic006G263100 Sobic002G379400--Sobic006G263100 Sobic001G436000 Sobic001G436000 Sobic002G379400--Sobic001G436000 Sobic002G294700 Sobic002G294700 Sobic002G379400--Sobic002G294700 Sobic001G081600 Sobic001G081600 Sobic004G025000--Sobic001G081600 Sobic004G025000--Sobic002G379400 Sobic006G095600 Sobic006G095600 Sobic004G025000--Sobic006G095600 Sobic002G344700 Sobic002G344700 Sobic004G025000--Sobic002G344700 Sobic004G025000--Sobic002G330300 Sobic001G476400 Sobic001G476400 Sobic004G025000--Sobic001G476400 Sobic001G063600 Sobic001G063600 Sobic004G025000--Sobic001G063600 Sobic001G314700 Sobic001G314700 Sobic004G025000--Sobic001G314700 Sobic010G076700 Sobic010G076700 Sobic004G025000--Sobic010G076700 Sobic002G330300--Sobic008G016900 Sobic002G330300--Sobic002G379400 Sobic010G052800 Sobic010G052800 Sobic002G330300--Sobic010G052800 Sobic002G330300--Sobic010G228000 Sobic007G011000 Sobic007G011000 Sobic002G330300--Sobic007G011000 Sobic002G330300--Sobic004G025000 Sobic002G330300--Sobic002G118600 Sobic002G330300--Sobic006G263100 Sobic007G188100 Sobic007G188100 Sobic002G330300--Sobic007G188100 Sobic001G189700 Sobic001G189700 Sobic003G338900--Sobic001G189700 Sobic010G076600 Sobic010G076600 Sobic003G338900--Sobic010G076600 Sobic009G217600 Sobic009G217600 Sobic003G338900--Sobic009G217600 Sobic003G338900--Sobic002G379400 Sobic003G338900--Sobic001G476400 Sobic001G341600 Sobic001G341600 Sobic003G338900--Sobic001G341600 Sobic001G290400 Sobic001G290400 Sobic003G338900--Sobic001G290400 Sobic003G296700 Sobic003G296700 Sobic003G338900--Sobic003G296700 Sobic001G473900 Sobic001G473900 Sobic003G338900--Sobic001G473900 Sobic008G016900--Sobic002G330300 Sobic008G016900--Sobic002G379400 Sobic010G062800 Sobic010G062800 Sobic008G016900--Sobic010G062800 Sobic001G283500 Sobic001G283500 Sobic008G016900--Sobic001G283500 Sobic008G016900--Sobic007G188100 Sobic004G145200 Sobic004G145200 Sobic008G016900--Sobic004G145200 Sobic001G162100 Sobic001G162100 Sobic008G016900--Sobic001G162100 Sobic009G059700 Sobic009G059700 Sobic008G016900--Sobic009G059700 Sobic002G343500 Sobic002G343500 Sobic008G016900--Sobic002G343500 Sobic002G374100 Sobic002G374100 Sobic010G228000--Sobic002G374100 Sobic010G228000--Sobic002G118600 Sobic010G228000--Sobic007G188100 Sobic010G228000--Sobic002G294700 Sobic010G228000--Sobic002G330300 Sobic004G280800 Sobic004G280800 Sobic010G228000--Sobic004G280800 Sobic010G246000 Sobic010G246000 Sobic010G228000--Sobic010G246000 Sobic010G228000--Sobic002G379400 Sobic010G228000--Sobic001G290400 Sobic001G147200 Sobic001G147200 Sobic002G118600--Sobic001G147200 Sobic002G118600--Sobic001G341600 Sobic003G341100 Sobic003G341100 Sobic002G118600--Sobic003G341100 Sobic002G118600--Sobic010G228000 Sobic002G118600--Sobic002G374100 Sobic002G118600--Sobic001G290400 Sobic002G118600--Sobic007G011000 Sobic001G538866 Sobic001G538866 Sobic002G118600--Sobic001G538866 Sobic006G228300 Sobic006G228300 Sobic002G118600--Sobic006G228300 Sobic006G263100--Sobic004G280800 Sobic006G263100--Sobic010G246000 Sobic006G263100--Sobic001G290400 Sobic006G263100--Sobic002G379400 Sobic006G263100--Sobic002G330300 Sobic006G263100--Sobic001G147200 Sobic006G263100--Sobic002G294700 Sobic006G263100--Sobic010G228000 Sobic001G409900 Sobic001G409900 Sobic006G263100--Sobic001G409900 Sobic001G436000--Sobic002G379400 Sobic002G293300 Sobic002G293300 Sobic001G436000--Sobic002G293300 Sobic001G436000--Sobic004G025000 Sobic008G059000 Sobic008G059000 Sobic001G436000--Sobic008G059000 Sobic001G436000--Sobic001G081600 Sobic001G436000--Sobic002G330300 Sobic003G367300 Sobic003G367300 Sobic001G436000--Sobic003G367300 Sobic006G205200 Sobic006G205200 Sobic001G436000--Sobic006G205200 Sobic001G436000--Sobic002G344700 Sobic008G177800 Sobic008G177800 Sobic002G294700--Sobic008G177800 Sobic010G234600 Sobic010G234600 Sobic002G294700--Sobic010G234600 Sobic006G231100 Sobic006G231100 Sobic002G294700--Sobic006G231100 Sobic002G294700--Sobic002G374100 Sobic004G286600 Sobic004G286600 Sobic002G294700--Sobic004G286600 Sobic001G077700 Sobic001G077700 Sobic002G294700--Sobic001G077700 Sobic002G294700--Sobic010G246000 Sobic004G036600 Sobic004G036600 Sobic002G294700--Sobic004G036600 Sobic002G278500 Sobic002G278500 Sobic002G294700--Sobic002G278500
Octagon: transcription factors


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